Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  134 bits (336), Expect = 1e-35
 Identities = 85/272 (31%), Positives = 143/272 (52%), Gaps = 8/272 (2%)

Query: 253 IRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSH 312
           +R I+  + D++R LG+ ++ +   T+E  +   +Q   +     A   +    + ++ +
Sbjct: 367 LRRIVSELNDASRTLGDSSSGMLGVTEESRKNSESQADQLAHTASAMQEMTHTVDDIARN 426

Query: 313 THSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEI 372
              A ++  +   H  E    +  T +++  L       +     L  + + VG ++  I
Sbjct: 427 AQRASEMASEADHHAQEGMGVVEDTRRSIMVLVDNITDVSGIIENLEKETENVGSILDVI 486

Query: 373 GGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLS-- 430
            GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L++RTQ +T++IQ  I  + +  
Sbjct: 487 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQNSTEEIQALIGRLQAES 546

Query: 431 --TIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELT 488
             ++E+ R ++T +  QT + A  A   L  + D    + DM     ++A AA+ Q  + 
Sbjct: 547 RRSVESMRVNVTEA-TQTSEKANKAIAALGAIADSVMAIRDMNH---QIAVAAEEQATVV 602

Query: 489 CEVNQHIHSIASVATQNSAATHTVEQLAMAMS 520
             +N  +  I+ +A  N+A +  V+  A  +S
Sbjct: 603 GTINVSVEEISGLARMNAAGSEQVQNSANGIS 634