Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  129 bits (324), Expect = 3e-34
 Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 9/274 (3%)

Query: 240 SVADYHLKMASAR--IRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQ 297
           S AD H ++   R  + T+ G +      L      L    ++  Q  A       A+  
Sbjct: 362 SPADTHNEVDHIRNSVATMAGNLKTLIESLKSSVTTLGTMAEDARQIAAQNGDEATALMA 421

Query: 298 ATDAVESAAERVSS-------HTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAES 350
            TD + +A E +S+       H+    Q    V     E +  ++    +L RL+    +
Sbjct: 422 QTDQIATAIEEMSTSIRDVAEHSSDGAQQSQSVDSAAKEGQKRLDGMVADLGRLSEVLAA 481

Query: 351 AALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 410
           +     ++S +++ + Q+   I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 482 SHDAVEQVSKESEAISQVTEVINSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 541

Query: 411 SARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDM 470
           ++RTQ + Q+I  +I  +   + +    +  + +  + CA+  + T ++L  +   + D+
Sbjct: 542 ASRTQSSIQEISKTIGNLQDKVRSTAAQMKKAHELGQSCAEQGSITGEELDTITGRIGDL 601

Query: 471 LRVIGEVASAAQHQRELTCEVNQHIHSIASVATQ 504
             V   +ASA Q Q  +  ++ +++H I+ +A +
Sbjct: 602 ATVSASIASATQQQSTVAEDITRNLHLISDLARE 635