Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (351), Expect = 2e-37
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 16/354 (4%)

Query: 191 WQWLASLL----PAGVLGLLFRQELVRTPQQ-LKQWQN----EYDSISRLIYSGADAFSV 241
           WQ+L   L    P   L L+  + +    Q+ L  ++N    E +   RL   G D  S 
Sbjct: 201 WQYLLVFLLVWGPVMALLLMISRSVTEPLQRTLMAFKNIAEGEANLTLRLEERGRDELSQ 260

Query: 242 ADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDA 301
              +      RI++++  + DS     +L++ L     +   A  +     Q+V  A + 
Sbjct: 261 VSVYFNAFVGRIQSLVISVRDSVDHSRQLSSSLSNVAHQAAHATNSMQQETQSVAAAINQ 320

Query: 302 VESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQ 361
           + + A  V+++   A +           T   +     N+++L+++ E  +     L   
Sbjct: 321 MSATASEVAANAQLAAKSAKNADSQADSTNLVVTHAMGNVRQLSSELEETSEIAKALKVS 380

Query: 362 AQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQI 421
           + ++GQ++  I GIAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L++RTQ++TQ+I
Sbjct: 381 SGEIGQILDVIVGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLASRTQQSTQEI 440

Query: 422 QTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAA 481
              I+ +   ++     +  +R Q++    +    +  L  ++  +  +  +  ++A+A 
Sbjct: 441 NAIIEAIRGAVDKVNASVARARQQSDNTVDETAQVMDALGLIKQAIGQINDMNLQIATAT 500

Query: 482 QHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQFAQ 535
             Q  +  E+N++I+ I  ++ +N + + TV       S ++AE    S+Q AQ
Sbjct: 501 DEQSAVIAELNENINRINEISVENLSKSETVGH----TSDRIAED---SRQMAQ 547