Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 7e-38
 Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 7/310 (2%)

Query: 224 EYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQ 283
           E D   RL  SG D  S+          +++ ++G +   A  L      L+ + +E  +
Sbjct: 235 EGDLRGRLDDSGRDELSLLARTFNGLMMKLQQLIGTIKSDAVSLDARVTGLNHSAKESEK 294

Query: 284 ALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQR 343
               QN+N++ +  A   +  A   V+S + +A    +   +   E+   +  + + +Q+
Sbjct: 295 ISTEQNANLEQIATAVHQLSHAVHEVASSSQNALSDTEHANNLIKESNAVVGQSVERVQQ 354

Query: 344 LATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 403
           LA     A+     L+ +++Q+  ++  I GIAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 355 LAGVVSHASEVIQNLASESKQIVTVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVV 414

Query: 404 ADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDV 463
           ADEVR L++RTQ++T+ IQ  +  + S +      I +   Q +     + +  + L +V
Sbjct: 415 ADEVRTLASRTQQSTEDIQRMVAGLESGVSEAVSAIDSGTRQVDSVVDASGSITKALAEV 474

Query: 464 ECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSI-------ASVATQNSAATHTVEQLA 516
           +  +S    +I  +A+A + Q ++  EVNQ+I S+         V  +   A   + Q+ 
Sbjct: 475 DEAVSRTKDLIYLIATATEQQSKVVDEVNQNISSLNLLSQESIGVVRRTREAADEIAQIG 534

Query: 517 MAMSGKVAEF 526
             +SG V  F
Sbjct: 535 TGLSGNVGRF 544