Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  252 bits (644), Expect = 2e-71
 Identities = 175/524 (33%), Positives = 255/524 (48%), Gaps = 21/524 (4%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P   +EV + +   ++STTDLKG I Y N  FC IAGF+ +EL+ + HN++RH  MP AA
Sbjct: 6   PVTLREVELDNEAIILSTTDLKGRIKYVNQDFCNIAGFREEELVHEPHNLIRHPDMPPAA 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           F  +W  +++G  W G+VKNR K+G +YWVDAYVTP+Y+ G++  YQSVR K   K  E 
Sbjct: 66  FKMLWSRIREGRPWMGLVKNRCKNGDYYWVDAYVTPVYEDGEVHEYQSVRRKVNAKHRER 125

Query: 142 ATKAYQALLAAEKAGKKIQFKLHTSLRYALLLGALMSPALAHGFQA-PEQWQ-WLA-SLL 198
           A   Y  L+      K  Q  +    R+ +    ++  AL  G  A   QW  WL   LL
Sbjct: 126 AESLYAELV------KDPQPAILRDSRFGVCGKLMLWMALMLGVSAVAAQWSLWLVLLLL 179

Query: 199 PAGVLG----LLFRQELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASARIR 254
           P  +LG    L   +EL    + + Q     D ++R +Y+G     + D  L M      
Sbjct: 180 PIALLGCRSLLAPLRELASEARSIIQ-----DPVARAVYTGR-RDEIGDLMLAMRFMTNE 233

Query: 255 T--ILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSH 312
           T  ++GRM DS   +   +N L        +    Q    Q    A + +  +   V  H
Sbjct: 234 TGGVMGRMADSTETMANQSNDLLDAIARSAERADGQRQQTQQAAAAVEELHVSFAEVKEH 293

Query: 313 THSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEI 372
           T +    ++Q Q      +  +      +Q+L  Q         +++  +Q + Q++  I
Sbjct: 294 TLAVVSDVEQCQSAMGLGQQQLAEVELAMQQLQHQMSLCDAVVREIASDSQAINQVLEVI 353

Query: 373 GGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTI 432
           G IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR LS RT  +T QI+  +    S+ 
Sbjct: 354 GTIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRQLSGRTGESTGQIEGIVRKFQSST 413

Query: 433 EAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVN 492
                ++  S+ Q +  A       Q    +E  ++ +  +    A A   Q      ++
Sbjct: 414 ARAEANLDNSQQQLKTLAARLGQVQQAFGALEGAINTIKSLSDHSAHAMTEQSSAAGSIS 473

Query: 493 QHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQFAQK 536
             + +I  +A      +   EQL   MS   ++   LSKQF QK
Sbjct: 474 DSLQTINELAEAVLNQSREAEQLGARMSRLSSKTSGLSKQFWQK 517