Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (324), Expect = 2e-34
 Identities = 93/308 (30%), Positives = 156/308 (50%), Gaps = 15/308 (4%)

Query: 230 RLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQN 289
           RL + G D FS+    +   +  +  ++  + ++AR L   +++ +L  ++  +    Q+
Sbjct: 176 RLNFFGKDDFSLIAREIDRNADNMSEMVKAIGNNARTLANASDEFNLQAKQNDELAQFQH 235

Query: 290 SNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHC---AETKHSINVTHQNLQRLAT 346
             +  V  A D + +A E VS   H+A    D  + +    A++K  I    + + +L  
Sbjct: 236 QFLDTVAVAMDQMTAAIEEVS---HNAANTSDHTKHNATAAADSKQRIAEAVRRIGQLTG 292

Query: 347 QAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 406
           Q ++A+    +LS  A ++G ++T I GI+EQTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 293 QIDAASSAVDQLSGNATEIGAVVTTINGISEQTNLLALNAAIEAARAGEQGRGFAVVADE 352

Query: 407 VRALSARTQRATQQIQTSIDTMLSTIEAWRGDIT--------ASRDQTEQCAQDANTTLQ 458
           VR L+ RTQ+AT +IQ+ I+ + S       DIT          R   E    D +T   
Sbjct: 353 VRTLAGRTQQATVEIQSMIEGLQSG-SGQLADITHEIVEQAELGRAAIESVGSDVDTMAD 411

Query: 459 QLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMA 518
            +  V  + S +     E + +A+       E+     +I   A ++      ++Q +  
Sbjct: 412 SIDQVFDMSSQIAASAEEQSVSARDIASQLNEIRDQSQTIKETAERSVVLASELQQSSTE 471

Query: 519 MSGKVAEF 526
           + G ++++
Sbjct: 472 LDGILSQY 479