Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (371), Expect = 1e-39
 Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 19/306 (6%)

Query: 234 SGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQ 293
           SG D F+    +       +RT++  ++D +  L   A +    T +    +  Q + + 
Sbjct: 373 SGHDEFAELSRNCNRLVDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVD 432

Query: 294 AVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQN---LQRLATQAES 350
            V  AT  + S+A +VS+   SA + ++Q++    E +H   +  +N   +  LA +   
Sbjct: 433 QVATATTQLSSSAMQVST---SADEALNQIRQADEEAQHMRAIADENKRTILALADEVAK 489

Query: 351 AALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 410
           A     K+   +  +G ++  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L
Sbjct: 490 AGQVINKVHSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 549

Query: 411 SARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQC---AQDANTTLQQLQDVECVM 467
           ++RTQ +TQ+IQ  I  +    +     +   R Q   C    + AN  L+ + +     
Sbjct: 550 ASRTQDSTQEIQQMIQVLQQGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYA 609

Query: 468 SDMLRVIGEVASAAQHQRELTCEVNQHIHSIASV-------ATQNSAATHTVEQLAMAMS 520
            D       +A+AAQ Q  ++ +V++ +  IA++       A Q + ++H V QLA  + 
Sbjct: 610 HDSGT---HIANAAQEQNLVSQQVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQ 666

Query: 521 GKVAEF 526
             V EF
Sbjct: 667 ASVGEF 672