Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  151 bits (381), Expect = 8e-41
 Identities = 103/352 (29%), Positives = 187/352 (53%), Gaps = 26/352 (7%)

Query: 194 LASLLPAGVLGLLFRQELVRTPQQLKQWQNEY-----DSISRLIYSGADAFSVADYHLKM 248
           L ++L +  + ++  Q L+RT +++    NE      D   RL  +G D  +    +   
Sbjct: 307 LIAILLSAFITVIVTQSLLRTIREVVALLNEIADGEADLTQRLPVNGHDELTQLAKNFNR 366

Query: 249 ASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAER 308
              RI+ ++  + D+   +   + QL+  T    Q +++Q +  Q V  A   + ++A  
Sbjct: 367 FVLRIQQLVAEVKDTTVQMVSASTQLNSVTHSATQDMSSQQNETQLVASAITEMAASAVE 426

Query: 309 VSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQL 368
           V++   +A++L +  +      + ++     +++ LA++ E++A T  +L + + ++G +
Sbjct: 427 VAASADTANKLSEDAKAQALLGRETVTRATHSMRELASKVEASATTIEQLRNDSDKIGAV 486

Query: 369 MTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTM 428
           +  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L++RTQ +T+QIQ  I T+
Sbjct: 487 LDVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQESTKQIQQIIQTL 546

Query: 429 LSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRV-------IGEVASAA 481
                +    +  SR+ T       N+T++Q+  VE  +S +  +       + ++A AA
Sbjct: 547 QDRSGSAATMMGQSREAT-------NSTVEQVTQVESALSTITEMVMSITHSVSQMAHAA 599

Query: 482 QHQRELTCEVNQHIHSIASVAT-------QNSAATHTVEQLAMAMSGKVAEF 526
           + Q  +  E+N  I+S+   A        Q +++ + +  +   + G V+EF
Sbjct: 600 EQQSTVVEEINMSINSVNDSANRTLTGVKQAASSANGLLGIGQQLDGLVSEF 651