Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  139 bits (351), Expect = 2e-37
 Identities = 114/383 (29%), Positives = 190/383 (49%), Gaps = 30/383 (7%)

Query: 152 AEKAGKKIQFKLHTSLRYALLLGALMSPALAHGFQAPEQWQWLASLLPAGVLGLLFRQEL 211
           +E+A   I+ KL      ALL+G  ++  +A     P      A    A   G L R+  
Sbjct: 272 SEQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIE 331

Query: 212 VRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELA 271
           V++  ++ Q    ++  +  I+  A    V+D     +++ + T    M        ++A
Sbjct: 332 VKSKDEMAQLAQAFNRFAEKIH--ATVAQVSD-----STSLLATSAEEMSAITHETQQMA 384

Query: 272 NQLHLTTQEVHQALAAQNSNIQAVTQ-ATDAVESAAERVSSHTHSAHQLIDQVQDHCAET 330
           N+ HL T++V  A+    + +Q V   ATDA + AA   S  T     L+++V       
Sbjct: 385 NRQHLETEQVATAMNEMAATVQEVAHNATDAAD-AATHASESTEQGKLLVEKVIS----- 438

Query: 331 KHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEA 390
                     +  LA +   AA    +L     Q+  ++  I  IA+QTNLLALNAAIEA
Sbjct: 439 ---------TISLLADEIAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEA 489

Query: 391 ARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCA 450
           ARAGEQGRGFAVVADEVR L++RTQ +T +IQ  I+T+  + +A    +  S   T+ C 
Sbjct: 490 ARAGEQGRGFAVVADEVRTLASRTQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCV 549

Query: 451 QDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVAT------- 503
              +     L+ +   +S + ++  ++ASAA  Q  ++ E+N+++++I  +AT       
Sbjct: 550 SLVHEAGSALEAITQAVSTISQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAM 609

Query: 504 QNSAATHTVEQLAMAMSGKVAEF 526
           Q + A   + QL+M ++  +++F
Sbjct: 610 QTARAGDELAQLSMRLTTLLSQF 632