Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  144 bits (364), Expect = 7e-39
 Identities = 88/312 (28%), Positives = 156/312 (50%)

Query: 222 QNEYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEV 281
           + E D   RL   G D  +       +   +++TI+G +  +   +   AN +H  T+ +
Sbjct: 241 KGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVM 300

Query: 282 HQALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNL 341
            + L + N+    V  A   + + A  V+ +T    +         A  +  ++ + + +
Sbjct: 301 SRQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEI 360

Query: 342 QRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFA 401
             L  Q  +AA     LS+Q+Q++  +++ IGGIAEQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 361 SALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFA 420

Query: 402 VVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQ 461
           VVADEVR L++RTQ +T +I   +  +   +      +  S+    +    +    + L 
Sbjct: 421 VVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLG 480

Query: 462 DVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSG 521
            V   ++ +  +  ++A+AA  Q  +T E+N+++ +I  +  +   ++     ++  +S 
Sbjct: 481 SVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQ 540

Query: 522 KVAEFGALSKQF 533
           +    G L  QF
Sbjct: 541 EGLNLGKLVGQF 552