Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  144 bits (362), Expect = 1e-38
 Identities = 96/303 (31%), Positives = 150/303 (49%), Gaps = 13/303 (4%)

Query: 234 SGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQ 293
           SG D F+    +       +R ++  ++D +  L   A Q    T +    +  Q S + 
Sbjct: 372 SGHDEFAELAKNCNRLVDSLRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVD 431

Query: 294 AVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQN---LQRLATQAES 350
            V  AT  + S+A++VS    SA   + Q++    E KH   +  +N   +  LA +   
Sbjct: 432 QVATATTELSSSAQQVSM---SADDALAQIKQADQEAKHMRTIAEENKRTILALADEVAK 488

Query: 351 AALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 410
           A     K+   +  +G ++  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L
Sbjct: 489 AGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 548

Query: 411 SARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDM 470
           ++RTQ +T++IQ  I+ +    +     +   R Q   C          L+ +   +   
Sbjct: 549 ASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKA 608

Query: 471 LRVIGEVASAAQHQRELTCEVNQHIHSIASV-------ATQNSAATHTVEQLAMAMSGKV 523
                 +A AAQ Q  ++ +V++ +  IA++       A Q + ++H V +LA  +   V
Sbjct: 609 YDAGTHIAHAAQEQNVVSQQVSEKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASV 668

Query: 524 AEF 526
            EF
Sbjct: 669 GEF 671