Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  137 bits (345), Expect = 1e-36
 Identities = 89/318 (27%), Positives = 158/318 (49%), Gaps = 7/318 (2%)

Query: 216 QQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLH 275
           + LK  + + D   +      D        L      +R IL  + ++A  +   A +L 
Sbjct: 222 ENLKTIRQDSDLTVKFKTFNDDELGQISTSLTQVIEHLRGILHSIAEAANTVNSSATELS 281

Query: 276 LTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSIN 335
             TQ  ++ +  Q +  +    A + + +    V+    +A         + A   H + 
Sbjct: 282 SFTQATNKRMQQQQAETEQTATAMNEMTATVAEVAQSAAAAADSAKDADSYAANGNHIVM 341

Query: 336 VTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGE 395
            +  ++ +L+ Q +  A     LS+++Q +G+++  I  IAEQTNLLALNAAIEAARAGE
Sbjct: 342 QSITSMSQLSEQIQKTAQVIGFLSNESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGE 401

Query: 396 QGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANT 455
           QGRGFAVVADEVR L+ RTQ++TQ+I+  I T+   ++     +    +Q +     AN 
Sbjct: 402 QGRGFAVVADEVRTLAQRTQKSTQEIEAMIATLQQGVKEAVNAMEVGINQVDDANDKANQ 461

Query: 456 TLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQN-------SAA 508
             Q L+++   + ++  +   +A+AA+ Q  +   +N+ I +I+ +A  +       S +
Sbjct: 462 AGQALKEIVASVDNITELNTHIATAAEEQSSVAESINRSIIAISDIAEHSTNSALELSES 521

Query: 509 THTVEQLAMAMSGKVAEF 526
              + +LA +M  +V+ F
Sbjct: 522 VLNLTKLANSMRNQVSAF 539