Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., Transcriptional regulator, LacI family from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (296), Expect = 2e-31
 Identities = 91/337 (27%), Positives = 170/337 (50%), Gaps = 13/337 (3%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           ++++ +VARLAGVS +TVSR +     V   T+ KV  AVEQ GY  N +A   +S++T 
Sbjct: 1   LSNIREVARLAGVSVATVSRTLKSPERVLPETRDKVNAAVEQAGYRPNLMAVQFRSRRTG 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            + ++VP +++   A+ + G     + AG  +LL +T      E E+  +    + +G++
Sbjct: 61  NLVILVPAIANTFFARVISGAQQAAQAAGYRLLLCDTRGRAQIEREFAALVYAHQADGVI 120

Query: 121 -FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQI 179
              A+   + +   ++  ++P+V   +       P+I  D+        + L+  G ++I
Sbjct: 121 QLRASDPFESMPAGVE--SLPLVNACEVVKNAPYPTISLDNRAAAQAMTEHLIGLGHRRI 178

Query: 180 GFI-GVQSDDIAVDVLRSQGLQQALG----FHQQTLLFHARGNFSIESGYQMAKQAYLDY 234
           G I G +S  + +D  R  G Q AL         +L+ H  G+F++++G   A       
Sbjct: 179 GIIKGPRSSPLTLD--RVAGYQDALSQAGIAVDPSLICH--GDFTLKAGDDGAGAMLALA 234

Query: 235 PQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKA 294
            +   LFC  D +A+GA++ ++++G+ V + + L+G  +   A   +PPL+T +   +  
Sbjct: 235 DRPSALFCENDEMAIGALRRIKQMGLRVPEDISLVGFDDIPFAAYCDPPLTTISQPAEIF 294

Query: 295 GENAAKMLLERIAGRGQEMSKVVLTFQ-NIQRETCPV 330
           GE A +ML+  I  +      VVL F+  ++  T P+
Sbjct: 295 GEKAVQMLIALIEKKPIAERHVVLPFELTVRGSTAPL 331