Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  124 bits (311), Expect = 3e-33
 Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 12/313 (3%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA++ DVA LAG+S +TVS V+N+   V E  ++KV  A+ Q  Y+ + VA+ LK++ T+
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTS 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            IG+++P   +   A+   G+    E+ G  V+L N+     K+  Y+++  +KRV+G++
Sbjct: 61  TIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLI 120

Query: 121 FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPS-IVHDDHRVG-FEAGQRLVKAGCKQ 178
             +   D  +   +     P+V+V  D  L  I + +V  DH  G + A + L+  G + 
Sbjct: 121 VSSVGGDAGIAGGLAEVRTPLVIV--DRELDGIDADMVRIDHEQGAYLATRHLLDLGHRA 178

Query: 179 IGFIGVQSDDIAVDVLRSQGLQQALGFHQQTLLFHA----RGNFSIESGYQMAKQAYLDY 234
           I  IG        + +R  G ++AL   Q ++   A       F+  +G++ A Q    +
Sbjct: 179 IACIGGPFHSTVAE-MRLAGYRRAL--QQASVPVRAEWALHSEFTSSAGHEAACQLLAAH 235

Query: 235 PQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKA 294
           P    +F   D +A+G ++A  E  + V Q + ++G  + +++    P L+T   +  + 
Sbjct: 236 PP-TAIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQL 294

Query: 295 GENAAKMLLERIA 307
           GE AA+MLL RIA
Sbjct: 295 GETAAEMLLSRIA 307