Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  129 bits (325), Expect = 8e-35
 Identities = 92/338 (27%), Positives = 168/338 (49%), Gaps = 24/338 (7%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           M ++  V+ LAGVS +TVSR +     V E T+ KV++AV+Q GY  N +A  +K+ K+N
Sbjct: 1   MTNIKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSN 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            I V+VP + +    + ++G+    ++ G  VLL +T  + A+E EY  +    R +G++
Sbjct: 61  AIVVLVPNLVNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHEYASMVLTNRADGLI 120

Query: 121 -----FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAG 175
                F  +  D  L   I   +V   + G        P I  D+H  G      L+  G
Sbjct: 121 QLDHSFPFSDNDADLAATIPMVSVCERIEGD----RKYPFIELDNHAAGRALAHHLIGFG 176

Query: 176 CKQIGFIG------VQSDDIA--VDVLRSQGLQQALGFHQQTLLFHARGNFSIESGYQMA 227
            K  G I       +  D +   + VL+ +G+     F +  L+     ++SIE+G + A
Sbjct: 177 HKHFGIIAGQRRSQIHHDRLTGIMSVLQGEGID----FKEDMLV---GSSYSIETGIEGA 229

Query: 228 KQAYLDYPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTF 287
           ++     P+   +FC  D +A+GA+  ++  G+ +   + + G  N +++   +PPL+T 
Sbjct: 230 RELLSRNPRPSAIFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTI 289

Query: 288 NYAFDKAGENAAKMLLERIAGRGQEMSKVVLTFQNIQR 325
           +    + G NA ++L+++I       S+V++ F  ++R
Sbjct: 290 DQPAYEMGRNAVEVLVQQINRLPLARSRVIMPFHLLER 327