Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., putative HTH-type transcriptional regulator from Phaeobacter inhibens DSM 17395

 Score =  118 bits (295), Expect = 2e-31
 Identities = 85/322 (26%), Positives = 146/322 (45%), Gaps = 4/322 (1%)

Query: 6   DVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIGVI 65
           DVA +AGVS+S VSR   +   + +  + ++L A  + GY  N +A  L+  ++NL+ V 
Sbjct: 19  DVAEIAGVSRSAVSRAFTEGAYLDQEKRERILLAAHELGYQPNALAATLQGARSNLVAVF 78

Query: 66  VPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFYATH 125
              + +    +    L A    AGK  ++      HA++    Q+     ++ ++  +  
Sbjct: 79  AGEMRNEYDKEATSALIAGLNAAGKWPVVIAGSGDHARD-AVTQVLRYP-LDAMILRSGS 136

Query: 126 LDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIGFIGVQ 185
           L   +V       +PV+  G+      + +I   +H+    A     K G +++  +G  
Sbjct: 137 LATEIVDLCSKLHIPVIASGRIIDAERVDNICLRNHQAAMLAADLFAKRGRQRVALVG-G 195

Query: 186 SDDIAVDVLRSQGLQQALGFHQQTLLFHARGNFSIESGYQMAKQAYLDYPQLDGLFCATD 245
            DD      R  GL   L  HQ TL    +GN++ ESGY  A Q  L+    DG+FCA D
Sbjct: 196 PDDFGATAERRNGLLDGLTKHQLTLAGEIKGNYTTESGY-FATQRLLEQANFDGIFCAND 254

Query: 246 RLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAAKMLLER 305
            +A+GA+ AL++ G  V Q + ++G  + E+A      L+T             + L  R
Sbjct: 255 AMAIGALGALKDAGRLVSQDISVIGFDDIEMARWPTIRLTTLRNPIADMVTAVLRCLDRR 314

Query: 306 IAGRGQEMSKVVLTFQNIQRET 327
           +     +   V+L  + I R+T
Sbjct: 315 LDHPQAQEETVLLDAEIILRDT 336