Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., ribose operon transcriptional repressor RbsR from Pantoea sp. MT58

 Score =  124 bits (312), Expect = 2e-33
 Identities = 96/327 (29%), Positives = 161/327 (49%), Gaps = 8/327 (2%)

Query: 4   LHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIG 63
           + DVARLAGVS STVS VIN+   V +  + KV +A+    Y  + +A+ LK  +T+ IG
Sbjct: 1   MKDVARLAGVSTSTVSHVINNNRFVSDGVREKVEQAIRHLNYAPSALARSLKINQTHTIG 60

Query: 64  VIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFYA 123
           +++   S+   A+ V G+     Q G  ++L NT     +    ++   QKRV+G++   
Sbjct: 61  MLLTTSSNPFYAEVVRGVEESCYQRGYSLILCNTAGDEERMNRSLETLMQKRVDGLLMMC 120

Query: 124 THLDQPLVHAI-QHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFE-AGQRLVKAGCKQIGF 181
           T    P    + ++ ++P V++           I+ D+  +G E A Q L+  G  +I  
Sbjct: 121 TESHLPSADILNRYPSIPTVMMDW-APFEGRGDIIQDNALLGGELATQHLIDCGYTRIAC 179

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFHQQTLL--FHARGNFSIESGYQ-MAKQAYLDYPQLD 238
           I    D      +R +G + A+      +L  +   G+F  + GY  M +   L+ P  +
Sbjct: 180 IAGPQDKTPAR-MRLEGYRNAMTKSGLEILPGYVVNGDFEFQGGYNGMVELLALETPP-E 237

Query: 239 GLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENA 298
            +F + D +AVG   AL + G+ + QQ+ ++G  + ELA    PPLST +   D  GE A
Sbjct: 238 AVFTSNDAMAVGVYHALYQAGMRIPQQMAVMGYDDIELARYLTPPLSTIHQPKDALGELA 297

Query: 299 AKMLLERIAGRGQEMSKVVLTFQNIQR 325
              L+ R++        +VLT + + R
Sbjct: 298 IDTLIHRLSDPDASQQTLVLTPELVVR 324