Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., sugar binding transcriptional regulator, LacI family protein from Klebsiella michiganensis M5al

 Score =  115 bits (287), Expect = 2e-30
 Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 28/338 (8%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           +L DVAR AG+S  TVSR +N    V+  T  KV++AV+  GY+ N +A  L S+++ L+
Sbjct: 11  TLDDVARSAGLSSMTVSRALNTPQLVRPKTVEKVMQAVQATGYIPNALAGGLASRRSKLV 70

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            V+VP+++++     +  L+      G H+LL         E E +     +R +G+V  
Sbjct: 71  AVVVPQINNNMFVDTIQALSDTLAARGYHMLLCVAGYSRQTEAELVATLLSRRPDGVVLT 130

Query: 123 ATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDH-RVGFEAGQRLVKAGCKQIGF 181
                  L   I ++A PVV +  D +   +  +V   H +VG   G+ L++ G ++ G 
Sbjct: 131 GIQHAPALKKTILNAATPVVEI-WDLTPTPLDMLVGFSHEKVGETIGEYLLEKGYRRPGL 189

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFH------------QQTLLFHARGNFSIESGYQMAKQ 229
           +       A   LR QGL   L  +              +L    RG   + +G      
Sbjct: 190 LWAGD---ARATLRKQGLCARLAKNGIDDAPQVEVPLPASLALGRRGLAELLAG------ 240

Query: 230 AYLDYPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNY 289
                 + D + C++D LA GAI   +  G+ V Q + ++G G+ + A  + P ++T + 
Sbjct: 241 -----GEFDVIVCSSDTLAQGAIMEAESRGLRVPQDLAVIGFGDLDFAASNRPAITTVSV 295

Query: 290 AFDKAGENAAKMLLERIAGRGQEMSKVVLTFQNIQRET 327
                GE AA +L +RI G G+    + + F  + RE+
Sbjct: 296 DRHAIGEQAATLLADRIEGGGEGDVIIDIGFHLVARES 333