Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., transcriptional regulator RbsR from Klebsiella michiganensis M5al

 Score =  121 bits (304), Expect = 2e-32
 Identities = 99/328 (30%), Positives = 167/328 (50%), Gaps = 10/328 (3%)

Query: 4   LHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIG 63
           + DVAR+AGVS STVS VIN +  V E+   KV  A++   Y  + +A+ LK  +T  IG
Sbjct: 1   MKDVARIAGVSTSTVSHVINKDRFVSEAITAKVDAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 64  VIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFYA 123
           +++   ++   ++ V G+     + G  ++L NT     +    ++   QKRV+G++   
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 124 THLDQPLVHAIQ-HSAVPVVLVGQDGSLYNIPS-IVHDDHRVGFE-AGQRLVKAGCKQIG 180
           T   QP    +Q + +VP V++  D + ++  S ++ D+  +G + A + L+  G  +I 
Sbjct: 121 TETHQPSPEIMQRYPSVPTVMM--DWAPFDGDSDLIQDNSLLGGDMATKYLIDQGYTRIA 178

Query: 181 FIGVQSDDIAVDVLRSQGLQQALGFHQQTLL--FHARGNFSIESGYQMAKQAYLDYPQL- 237
            I    D      LR +G Q A+     T+   +    +F    G+  A Q  L    L 
Sbjct: 179 CIAGPLDKTPAR-LRLEGYQAAMARAGLTVPEGYVISSDFEFGGGFS-AMQKLLTLSALP 236

Query: 238 DGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGEN 297
             +F   D +AVGA +AL + G+ + Q + L+G  + ELA    PPL+T +   D+ GE 
Sbjct: 237 QAVFIGNDAMAVGAYQALYQGGLRIPQDMALVGYDDIELARYMTPPLTTIHQPKDELGEL 296

Query: 298 AAKMLLERIAGRGQEMSKVVLTFQNIQR 325
           A  +L+ R+A  GQ+  +V LT + + R
Sbjct: 297 AIDVLIHRMADPGQKQQRVQLTPELVVR 324