Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., Ribose operon repressor from Enterobacter sp. TBS_079

 Score =  120 bits (302), Expect = 4e-32
 Identities = 92/323 (28%), Positives = 160/323 (49%), Gaps = 12/323 (3%)

Query: 4   LHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLIG 63
           + DVAR AGVS STVS VIN++  V E+ + KV  AV+   Y  + +A+ LK  +T  IG
Sbjct: 1   MKDVARQAGVSTSTVSHVINNDRFVSEAIREKVEAAVKDLNYAPSALARSLKLNQTRTIG 60

Query: 64  VIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFYA 123
           +++   ++   ++ V G+     + G  ++L NT     +    ++   QKRV+G++   
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 124 THLDQPLVHAIQ-HSAVPVVLVGQ---DGSLYNIPSIVHDDHRVGFE-AGQRLVKAGCKQ 178
           T   QP    IQ + ++P V++     DG+      ++ D+  +G + A Q L+  G  +
Sbjct: 121 TETHQPSKEIIQRYPSIPTVMMDWAPFDGT----SDLIQDNSLLGGDMATQYLIDKGYTR 176

Query: 179 IGFIGVQSDDIAVDVLRSQGLQQALGFHQQTLL--FHARGNFSIESGYQMAKQAYLDYPQ 236
           I  I    D      LR +G   A+     T+   +   G+F    G++  ++      +
Sbjct: 177 IACITGPLDKTPAR-LRLEGYLSAMARAGLTVPDGYRITGDFEFNGGFEAMQKLLSQAQR 235

Query: 237 LDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGE 296
              +F   D +A GA +AL + G+ V   + ++G  + ELA    PPL+T +   D+ GE
Sbjct: 236 PQAVFIGNDAMAFGAYQALYQAGLRVPHDMAVIGYDDIELARYMTPPLTTIHQPKDELGE 295

Query: 297 NAAKMLLERIAGRGQEMSKVVLT 319
            A  +L+ R+A  G +  ++ LT
Sbjct: 296 LAIDVLIHRMAEPGLQQQRLQLT 318