Pairwise Alignments

Query, 581 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 27/223 (12%)

Query: 44  GFEFMRYTLEALNVHYQVDRGRVEQIPAQGPVVIVANHPLGAIEGVILADLVGQ-VRKDV 102
           G +F+   +E L+   +V    +E +P +G    V+NHPLG  +GV L  ++G+     V
Sbjct: 55  GVDFLEACMEFLDAKVEVKG--IENLPKEGLYTFVSNHPLGGQDGVALGYVLGRHYDGKV 112

Query: 103 KVLANQLLKRLPEIEPLFIGVDVFNGAQASKTNARGIREAHRHLAEGGVLIVFPAGEVST 162
           K L N LL  L  + PL + ++   G QA        +           +I+FPAG  S 
Sbjct: 113 KYLVNDLLMNLRGLAPLCVPINK-TGKQAKDFP----KMVEAGFQSDDQMIMFPAGLCS- 166

Query: 163 PQKETGQLSDIDWSQS-VAKFIQRSQARCVPIYIHGRNSAWFYRAGKIHPLL----RTAM 217
            +++ G + D++W ++ + K IQ ++   VP++  GRNS +FY    +   L      AM
Sbjct: 167 -RRQNGVIRDLEWKKTFIIKSIQ-AKRDVVPVHFGGRNSDFFYNLANVCKALGIKFNIAM 224

Query: 218 --LGRELLNKSASTISLCIGQPIPY---------AELKEFTKD 249
             L  E+      T ++  G+PIP+         A+  E+ KD
Sbjct: 225 LYLADEMFKNRHKTFTVTFGKPIPWQTFDKSKTPAQWAEYVKD 267