Pairwise Alignments

Query, 126 a.a., VOC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., antigen, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 39.7 bits (91), Expect = 3e-08
 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 5/115 (4%)

Query: 8   WFEIYVNDMERAKTFYETVLKVSLEEMPNPTSMPIKMLTFPSNMEKYGASGALVKMEGIC 67
           W E+  +D   A+ FY  +   +  EMP P         F    +  GA   + + E   
Sbjct: 13  WVELASHDWLGAQAFYHALFGWNTVEMPIPMG---HFSLFNLQGDDLGAMYQIPQSESQT 69

Query: 68  AGGGGTLIYFSSDDCAVEQERIVAAGGQIHTPKMSIGEYGFITLAVDTEGNLFGL 122
                  IYF+  D       I+AAGGQ+H     +G+ G +    D EG  F L
Sbjct: 70  PSHWR--IYFAVKDIDASIAAILAAGGQLHIGPHVVGDAGVMAQVSDIEGARFAL 122



 Score = 25.0 bits (53), Expect = 8e-04
 Identities = 13/47 (27%), Positives = 18/47 (38%)

Query: 76  YFSSDDCAVEQERIVAAGGQIHTPKMSIGEYGFITLAVDTEGNLFGL 122
           YF   DC     +  A G Q+  P   I   G   +  D +G  F +
Sbjct: 205 YFRVADCDDIAAKAQALGAQLCVPPSDIPNVGRFAVIADAQGATFAI 251