Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., dihydrolipoamide dehydrogenase (RefSeq) from Shewanella loihica PV-4

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 113/451 (25%), Positives = 197/451 (43%), Gaps = 73/451 (16%)

Query: 2   TKIVIIGGVAGGASAAARARRLSEDAEIIMFER----GPYVSFANCGLP----YHIGGDI 53
           T++V++G    G SAA RA  L    E ++ ER    G       C +P     H+   I
Sbjct: 7   TQVVVLGAGPAGYSAAFRAADLG--LETVIVERFSTLGGVCLNVGC-IPSKALLHVSKVI 63

Query: 54  KERSNL----------------LLQTPESFLARFNVDVRTMNEVLRIN--RAAKTITVRN 95
           +E   +                L +  +S +++    +  M+++ ++N        T  N
Sbjct: 64  EEAKAISNHGVVFGEPQIDLDKLREFKQSVISQLTGGLGGMSKMRKVNVVNGLGKFTGPN 123

Query: 96  LLDQSEYDE----NYDFLLLSPGAGPV-IPPIPGIQNPLTHSLRNIPDMDKIIQTLQMNK 150
            ++ +  D     +++  +++ G+ P+ +P IP       H    I D    ++  ++  
Sbjct: 124 TIEVAGEDGVKVVHFEQAIIAAGSRPIQLPFIP-------HEDPRIWDSTDALELKEV-- 174

Query: 151 PEHATVVGGGFIGLEMMEAFHHLGIKTTLIEMADQVMTPVDREMAGFAHAEIRAKGIDLR 210
           P    V+GGG IGLEM   +  LG +  ++EM DQV+   D+++      +I+ K  +L 
Sbjct: 175 PGKLLVMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDIVRVYTKKIKNK-FNLI 233

Query: 211 LGAALKSVEYRPAATLPSAESGESLEHKHVEGELDLLLSNGDTLTTDILIMAIGVRPETK 270
           L   + +VE +      S E  +               +  + +  D +++AIG  P  K
Sbjct: 234 LETKVTAVEAKEDGIYVSMEGKK---------------APTEPVRYDAVLVAIGRTPNGK 278

Query: 271 L--AAEAGLQLGELGGIWVNEQMQTSDPAIYAVGDAVEEKDFVTGKQTLVPLAGPANRQG 328
           L  A +AG+ + E G I V++QM+T+ P IYA+GD V +            LA     +G
Sbjct: 279 LIDADKAGVNIDERGFINVDKQMRTNVPHIYAIGDIVGQP----------MLAHKGVHEG 328

Query: 329 RMAADNMLGRNESYQGTQGTAICKIFDLAVASTGKNEKQLKREGIAYEKV-YVHTASHAS 387
            +AA+ + G    +      +I    D  VA  G  EK+ K +GIAYE   +   AS  +
Sbjct: 329 HVAAEVIAGMKHYFDPKVIPSIA-YTDPEVAWVGLTEKEAKEQGIAYETASFPWAASGRA 387

Query: 388 YYPGAEVVSFKMLFDPQTGKIFGAQAVGKDG 418
                     K++FD +T ++ G   VG +G
Sbjct: 388 IASDCSEGMTKLIFDKETHRVIGGAIVGVNG 418