Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) from Shewanella loihica PV-4

 Score =  894 bits (2310), Expect = 0.0
 Identities = 445/565 (78%), Positives = 500/565 (88%), Gaps = 1/565 (0%)

Query: 1   MTKIVIIGGVAGGASAAARARRLSEDAEIIMFERGPYVSFANCGLPYHIGGDIKERSNLL 60
           M KI+IIGGVAGGASAAARARRLSE AEIIMFERG YVSFANCGLPYHI G+I +RS L+
Sbjct: 1   MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALV 60

Query: 61  LQTPESFLARFNVDVRTMNEVLRINRAAKTITVRNLLDQSEYDENYDFLLLSPGAGPVIP 120
           LQTPESF ARFNV+VR  +EV+ I+RAAK +TVR LLD SEY E+YD LLLSPGA P++P
Sbjct: 61  LQTPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120

Query: 121 PIPGIQNPLTHSLRNIPDMDKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTTLI 180
           PIPG+ NPLTHSLRNIPDMD+I+QT+QMN  EHATVVGGGFIGLEMME+ HHLGIKTTL+
Sbjct: 121 PIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLL 180

Query: 181 EMADQVMTPVDREMAGFAHAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEHKHV 240
           E+ADQVMTPVDREMAGFAH  IR +G+DLRLG AL  V Y+    + S  +GE   H+H+
Sbjct: 181 ELADQVMTPVDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHI 240

Query: 241 EGELDLLLSNGDTLTTDILIMAIGVRPETKLAAEAGLQLGELGGIWVNEQMQTSDPAIYA 300
           +G L L LSNG+ L TD+LIMAIGVRPET+LA +AGL +GELGGI VN  MQTSDPAIYA
Sbjct: 241 KGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYA 300

Query: 301 VGDAVEEKDFVTGKQTLVPLAGPANRQGRMAADNMLGRNESYQGTQGTAICKIFDLAVAS 360
           VGDAVEE+DFVTG+  LVPLAGPANRQGRMAADNM GR E YQGTQGTAICK+FDLAV +
Sbjct: 301 VGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGREERYQGTQGTAICKVFDLAVGA 360

Query: 361 TGKNEKQLKREGIAYEKVYVHTASHASYYPGAEVVSFKMLFDPQTGKIFGAQAVGKDGID 420
           TGKNEKQLK+ GIA+EKVYVHTASHASYYPGAEVVSFK+LFDP  G IFGAQAVGKDGID
Sbjct: 361 TGKNEKQLKQAGIAFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGID 420

Query: 421 KRIDVMAVAQRAGMTVEQLQHLELTYAPPFGSAKDVINQAAFVATNLIKGDAKAIHFDEI 480
           KRIDVMAVAQRAGMTVEQLQHLEL+YAPP+GSAKDVINQAAFVA+N+IKGDA  IHFD+I
Sbjct: 421 KRIDVMAVAQRAGMTVEQLQHLELSYAPPYGSAKDVINQAAFVASNIIKGDATPIHFDQI 480

Query: 481 DNLTDEQVLLDVRNPMELQNMGYLPGAINIPVDQLRQHMNELPKDKEIVIYCQVGLRGNV 540
           DNL+++Q+LLDVRNP ELQN G L GA+NIPVD+LR  M+ELPKDKEI+I+CQVGLRGNV
Sbjct: 481 DNLSEDQLLLDVRNPGELQN-GGLEGAVNIPVDELRDRMHELPKDKEIIIFCQVGLRGNV 539

Query: 541 AYRQLVNNGFKARNLIGGYRTYKFA 565
           AYRQLVNNG++ARNLIGGYRTYKFA
Sbjct: 540 AYRQLVNNGYRARNLIGGYRTYKFA 564