Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., pyruvate dehydrogenase complex, E3 component, lipoamide dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 90/317 (28%), Positives = 148/317 (46%), Gaps = 40/317 (12%)

Query: 106 YDFLLLSPGAGPV-IPPIPGIQNPLTHSLRNIPDMDKIIQTLQMNKPEHATVVGGGFIGL 164
           +D  +++ G+ P+ +P IP       H    I D    ++  ++  P    V+GGG IGL
Sbjct: 139 FDQAIIAAGSRPIKLPFIP-------HEDPRIWDSTDALELKEV--PGKLLVMGGGIIGL 189

Query: 165 EMMEAFHHLGIKTTLIEMADQVMTPVDREMAGFAHAEIRAKGIDLRLGAALKSVEYRPAA 224
           EM   +  LG +  ++EM DQV+   D+++      +I+ K  +L L   + +VE R   
Sbjct: 190 EMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKK-FNLILETKVTAVEAREDG 248

Query: 225 TLPSAESGESLEHKHVEGELDLLLSNGDTLTTDILIMAIGVRPETKL--AAEAGLQLGEL 282
              S E G+S              +  + +  D +++AIG  P  KL  A +AG+++ E 
Sbjct: 249 IYVSME-GKS--------------APAEPVRYDAVLVAIGRTPNGKLIDAEKAGVKIDER 293

Query: 283 GGIWVNEQMQTSDPAIYAVGDAVEEKDFVTGKQTLVPLAGPANRQGRMAADNMLGRNESY 342
           G I V++Q++T+ P IYA+GD V +            LA     +G +AA+ + G    +
Sbjct: 294 GFINVDKQLRTNVPHIYAIGDIVGQP----------MLAHKGVHEGHVAAEVIAGMKHYF 343

Query: 343 QGTQGTAICKIFDLAVASTGKNEKQLKREGIAYE-KVYVHTASHASYYPGAEVVSFKMLF 401
                 +I    D  VA  G  EK+ K +GIAYE   +   AS  +          K++F
Sbjct: 344 DPKVIPSIA-YTDPEVAWVGLTEKEAKEQGIAYETATFPWAASGRAIASDCSEGMTKLIF 402

Query: 402 DPQTGKIFGAQAVGKDG 418
           D  T ++ G   VG +G
Sbjct: 403 DKDTHRVIGGAIVGVNG 419