Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., dihydrolipoamide dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  111 bits (277), Expect = 7e-29
 Identities = 101/365 (27%), Positives = 166/365 (45%), Gaps = 46/365 (12%)

Query: 77  TMNEVLRINRAAKTITVRNLLDQSEYDENYDFLLLSPGAGPVIPPIPGIQNPLTHSLRNI 136
           T N V  +   A+ I  +N +   E   N + L+L  G+   IPPI G++     + R+ 
Sbjct: 101 TSNNVAMVTGEAQIID-KNTVRCGEETYNAENLILCTGSETFIPPITGVETVNYWTHRDA 159

Query: 137 PDMDKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTTLIEMADQVMTPVDREMAG 196
            D  ++        P    +VGGG IG+E    F+ LG++ T+IEM D+++  +D+E++ 
Sbjct: 160 LDSKEL--------PASLAIVGGGVIGMEFASFFNSLGVQVTVIEMMDEILGGMDKELSA 211

Query: 197 FAHAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEHKHVEGELDLLLSNGDTLTT 256
              AE   +GI   L   +          L   E G  + +++ EG+         ++  
Sbjct: 212 LLRAEYAKRGIKFLLSTKV--------VALSQTEEGAVVSYENAEGK--------GSVIA 255

Query: 257 DILIMAIGVRPETKLAAEAGLQLGEL--GGIWVNEQMQTSDPAIYAVGDAVEEKDFVTGK 314
           + L+M++G RP TK      L L +   G I VNE+MQTS   +Y  GD       +TG 
Sbjct: 256 EKLLMSVGRRPVTKGFGLENLNLDKTGRGAIKVNEKMQTSLSGVYVCGD-------LTGF 308

Query: 315 QTLVPLAGPANRQGRMAADNMLGRNE--SYQGTQGTAICKIFDLAVASTGKNEKQLKREG 372
                LA  A R+  +A  ++LG+ +  SY+   G       +  +A  G+ E+    +G
Sbjct: 309 SL---LAHTAVREAEVAVHSILGKEDAMSYRAIPGVVYT---NPEIAGVGETEESASAKG 362

Query: 373 IAYEKVYVHTASHASYYPGAEVVS--FKMLFDPQTGKIFGAQAVGKDGIDKRIDVMAVAQ 430
           I Y+ V +  A    +    E V+   K+L D Q  +I GA  +G     + I +   A 
Sbjct: 363 ITYKVVKLPMAYSGRFVAENEGVNGVCKVLLDEQE-RIIGAHVLGNPA-SEIITLAGTAI 420

Query: 431 RAGMT 435
             G+T
Sbjct: 421 ELGLT 425