Pairwise Alignments

Query, 567 a.a., NADH oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 826 a.a., pyridine nucleotide-disulphide oxidoreductase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  525 bits (1353), Expect = e-153
 Identities = 280/567 (49%), Positives = 379/567 (66%), Gaps = 23/567 (4%)

Query: 3   KIVIIGGVAGGASAAARARRLSEDAEIIMFERGPYVSFANCGLPYHIGGDIKERSNLLLQ 62
           KI+IIGGVAGGA+ AAR RR +E AEII+ E+G Y+S+ANCGLPY+IGG IKER  L +Q
Sbjct: 2   KIIIIGGVAGGATTAARIRRTNEAAEIILLEKGKYISYANCGLPYYIGGVIKEREKLFVQ 61

Query: 63  TPESFLARFNVDVRTMNEVLRINRAAKTITVRNLLDQSEYDENYDFLLLSPGAGPVIPPI 122
           TPE+F  RF VDVRT NEV+ I+R  KT+TVR     + Y+E+YD LL+S GA PV PP+
Sbjct: 62  TPEAFSTRFRVDVRTENEVIFIDRKRKTVTVRQSSGDT-YEESYDKLLISTGASPVRPPL 120

Query: 123 PGIQNPLTHSLRNIPDMDKIIQTLQMNKPEHATVVGGGFIGLEMMEAFHHLGIKTTLIEM 182
           PGI      +LRN+ D D+I + +  + P  A V+G GFIGLEM E  H  G K +++EM
Sbjct: 121 PGIDLNGIFTLRNVADTDRIKEYINSHAPRKAVVIGAGFIGLEMAENLHAQGAKVSIVEM 180

Query: 183 ADQVMTPVDREMAGFAHAEIRAKGIDLRLGAALKSVEYRPAATLPSAESGESLEHKHVEG 242
            +QVM P+D  MA   H  +  KG++L L  A+ S E            G+ L+      
Sbjct: 181 GNQVMAPIDFSMASLVHQHLMDKGVNLYLEQAVASFE----------RDGKGLK------ 224

Query: 243 ELDLLLSNGDTLTTDILIMAIGVRPETKLAAEAGLQLGELGGIWVNEQMQTSDPAIYAVG 302
              ++  NG +++ DI+I++IGVRPET LA  A L++GE GGI VN+ +QTSD +IYA+G
Sbjct: 225 ---VIFKNGQSISADIVILSIGVRPETTLARAAELKIGEAGGIAVNDYLQTSDESIYAIG 281

Query: 303 DAVEEKDFVTGKQTLVPLAGPANRQGRMAADNMLGRNESYQGTQGTAICKIFDLAVASTG 362
           DA+E +  +TGK  L  LAGPANRQGR+ ADN+ G +  Y+G  GT+I K+FD+ VASTG
Sbjct: 282 DAIEFRHPITGKPWLNYLAGPANRQGRIVADNIQGAHIPYEGAIGTSIAKVFDMTVASTG 341

Query: 363 KNEKQLKREGIAYEKVYVHTASHASYYPGAEVVSFKMLFDPQTGKIFGAQAVGKDGIDKR 422
              K+L++  I Y    +H +SHA YYP A  +S K+ FDP+TGK++G Q VG DG+DKR
Sbjct: 342 LPGKRLRQAEINYMSSTIHPSSHAGYYPDAMPMSIKITFDPKTGKLYGGQIVGYDGVDKR 401

Query: 423 IDVMAVAQRAGMTVEQLQHLELTYAPPFGSAKDVINQAAFVATNLIKGDAKAIHFDEIDN 482
           ID +A+  +   T+  L  +E  YAPPF SAKD +  A +VA N+I G  + +++ ++ +
Sbjct: 402 IDEIALVIKHEGTIYDLMKVEQAYAPPFSSAKDPVAVAGYVAENIITGKVQPVYWRQLRD 461

Query: 483 L-TDEQVLLDVRNPMELQNMGYLPGAINIPVDQLRQHMNELPKDKEIVIYCQVGLRGNVA 541
           +  +   LLDVR P E  ++  LPGA+NIP+D+LR  ++ELPKDK I  +C VGLRG +A
Sbjct: 462 IEMENNFLLDVRTPDEF-SLNTLPGAVNIPLDELRDRLDELPKDKMIYTFCAVGLRGYLA 520

Query: 542 YRQLVNNGF-KARNLIGGYRTYKFAKA 567
           YR LV +GF K RNL GG +TY  A A
Sbjct: 521 YRILVQHGFEKVRNLSGGLKTYHAAAA 547