Pairwise Alignments

Query, 139 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 152 a.a., Probable transmembrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (290), Expect = 2e-31
 Identities = 63/135 (46%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 6   PWDSLIGGMLLGISATLMLLMNGKIAGISGILTGLLTPKSRDFAWRLLFVVGMISGGVI- 64
           PW SL GGML+G++A L ++ NG+IAGISG++  LL   S     + LF++G++   ++ 
Sbjct: 18  PWSSLAGGMLIGLAAGLFVVANGRIAGISGLIGSLLQRGSEGVGEKALFLLGLLVAPLVW 77

Query: 65  GVKLLGHDVATDFGVSGIVLATAGLLVGVGTRLANGCTSGHGICGIGRFSKRSIVATCVF 124
           GV      +    G  G  L  AGLLVG+GTR  +GCTSGHG+CG+ R S RS+VAT  F
Sbjct: 78  GVFATLPPIEFQNGWFG--LTVAGLLVGIGTRYGSGCTSGHGVCGLSRLSPRSMVATACF 135

Query: 125 MAVAAVTVFVRLHLM 139
           M     TVFV  H+M
Sbjct: 136 MLSGFATVFVLRHVM 150