Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., Secretion protein HlyD from Pseudomonas syringae pv. syringae B728a

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 54/158 (34%), Positives = 90/158 (56%)

Query: 28  TVKTELISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSA 87
           TVK+   +  V L G VQ   Q  L+ + +G+++   VDV D V   QVL  +       
Sbjct: 40  TVKSADFAASVALTGDVQARVQTRLSFRVNGKIIQRNVDVGDRVTARQVLARLDPKDLQT 99

Query: 88  ALDAAQAQLASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAA 147
            +D+A A +A+  A+  +++A   R ++L PKG  S+ + DSA+A  R +++++K+AQA 
Sbjct: 100 NVDSAAAAVAAEQARVSQSRAAFVRQQKLLPKGYTSRSEYDSAQAAVRGSESSLKAAQAQ 159

Query: 148 VEQAKESLGYTNITAPYDGIVTQRMVELGETVAPGTPL 185
           +  A+E LGYT + A   G++T R  E+G+ V    P+
Sbjct: 160 LANAREQLGYTALVADAPGVITARQAEVGQVVQATMPI 197