Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum GMI1000

 Score =  133 bits (335), Expect = 7e-36
 Identities = 90/296 (30%), Positives = 145/296 (48%), Gaps = 11/296 (3%)

Query: 40  LDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASA 99
           L G +Q   +  + A+TSG V+  + D+   V+K +VL  +   +    L+ AQA    A
Sbjct: 96  LPGTLQGFVESPIYARTSGYVLRWFKDIGAHVEKGEVLALLDTPEVDQELNQAQAARNQA 155

Query: 100 TAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTN 159
            A+   AQ  L R++ L  K A+S+ ++D   + A  A A + +A+A V + +E  G+  
Sbjct: 156 AARRALAQTSLTRWQSLRQKDAVSQQELDERTSAANQAQADLAAAEANVRRLQELQGFRR 215

Query: 160 ITAPYDGIVTQRMVELGETVAPGT-----PLLRGFSLDELRVETEIPQRYQPYVADVSQF 214
           I AP+ G+VT+R V++G  V  G       L      D LR+   +PQ Y   V      
Sbjct: 216 IVAPFAGVVTKRNVDVGTLVNAGNAGANRELFTLAQTDPLRIYLYVPQAYSQQVKVGQDV 275

Query: 215 TVRTAQ--GEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEF----NYG 268
            V  A+  G+        + S  DP + T +  + LP  +  L+PG +V+ +        
Sbjct: 276 AVTLAELPGQVFHGAIARMSSAIDPATRTMQVEVSLPNQAGRLLPGAYVQAQIAGKAADD 335

Query: 269 QREVLVVPSSAVLRRAELSAVYRVNNGQRALNPVRLGQVYGDYVEVLSGLELGDVV 324
            +   VVP++ +L R E   +    NG+  L PV +G+ YG  VE+LSGL+ GD +
Sbjct: 336 PQTAFVVPTNTLLFRKEGPRIAVAENGRVNLRPVTIGRDYGRTVEILSGLQAGDAL 391