Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Ralstonia solanacearum GMI1000

 Score =  110 bits (276), Expect = 5e-29
 Identities = 95/317 (29%), Positives = 142/317 (44%), Gaps = 20/317 (6%)

Query: 28  TVKTELISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSA 87
           TV+   +    EL G ++      + A+ +G V+         VK + VL  I   Q  A
Sbjct: 44  TVQPHSVGLTTELPGRLEATRVAQVRARVAGIVLKRTYQEGSDVKANDVLFRIDPAQYQA 103

Query: 88  ALDAAQAQLASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAA 147
           +LD+A+AQLA A A   +AQ +  RY+ L    AISK   D A A A+ A A V +A+AA
Sbjct: 104 SLDSAKAQLARAEATQTQAQLKAERYKPLVATNAISKQDYDDAVAAAKQATADVGAARAA 163

Query: 148 VEQAKESLGYTNITAPYDGIVTQRMVELGETVAPGT------------PLLRGF---SLD 192
           VE AK +LGY  +T+P  G      V  G  V  G+            P+   F   S +
Sbjct: 164 VETAKLNLGYATVTSPISGRAGLAQVTEGALVGQGSDATLLATVQQIDPIYLTFTQSSTE 223

Query: 193 ELRVETEIPQRYQPYVAD-VSQFTVRTAQGEQLKPVEFSLFS--YADPQSHTFKTRLELP 249
            +R++  +         D  ++ T+ T  G          FS    D  + +   R   P
Sbjct: 224 VMRLQEALKAGKLAAAGDTAAKVTLVTEDGRVYAQTGKLYFSDLTVDQTTGSITLRAIFP 283

Query: 250 QNSAALVPGMWVKTEFNYG-QREVLVVPSSAVLRRAELSAVYRVN-NGQRALNPVRLGQV 307
                L+PGM+V+        ++ + VP  AV R A+ ++V  V+  G+ A  PV+  + 
Sbjct: 284 NAERTLLPGMYVRARLEQAVDQQAITVPQQAVSRGADGASVMIVDAEGKVAPRPVQADRA 343

Query: 308 YGDYVEVLSGLELGDVV 324
            G    V SGL+ GD V
Sbjct: 344 VGTDWIVSSGLKAGDKV 360