Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 17/278 (6%)

Query: 52  LAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATAQNREAQAQLN 111
           L  +T+GR+  +       V K  VL+ + A  Q A L  A+A  A A            
Sbjct: 85  LRPETAGRIASIGFKDGVPVAKGTVLVALDAATQEAELQQAKANHALAVTN-------FK 137

Query: 112 RYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNITAPYDGIVTQR 171
           R  +L  K  IS+  +D+  A  +  +AAV  A+A        L  T I AP+ G+V  R
Sbjct: 138 RTEELLAKKFISQQSLDTTAANLKVQEAAVALAEA-------KLAKTRIRAPFAGVVGIR 190

Query: 172 MVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYV--ADVSQFTVRTAQGEQLKPVEF 229
            V +G+ V  G  L+    +  L+++  +P+ Y   +      + +V     +  K V  
Sbjct: 191 EVSVGDYVKEGADLINLEDIRTLKLDFRLPELYLSRLQKGQAVEVSVDALPNQAFKAVLD 250

Query: 230 SLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQRE-VLVVPSSAVLRRAELSA 288
           ++    D        R  L      L PGM+ +    +G R+ VL++P  A++       
Sbjct: 251 AVDPLVDANGRAISLRARLDNPELKLRPGMFARVRLLFGNRDGVLMIPEQAIVSGGGKQT 310

Query: 289 VYRVNNGQRALNPVRLGQVYGDYVEVLSGLELGDVVAT 326
           V+R+  G+     V+ G      VE+LSGL  GD + T
Sbjct: 311 VFRIEEGKAKKVEVKTGLRRNAQVEILSGLAAGDRIIT 348