Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., RND family efflux transporter MFP subunit from Klebsiella michiganensis M5al

 Score =  114 bits (285), Expect = 4e-30
 Identities = 88/296 (29%), Positives = 142/296 (47%), Gaps = 3/296 (1%)

Query: 38  VELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLA 97
           +E  G +   ++ +L+ +T+GR++   VD+ D V   Q+L  +        LD+A A   
Sbjct: 72  LERTGEIHAHDETALSFRTAGRMMTRAVDIGDRVNYGQLLATLDDTSAQNQLDSATADEE 131

Query: 98  SATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGY 157
           SA A  R A   ++R ++L   GAI++ Q+DSA A    A A VKS++AA+  A+ESLG+
Sbjct: 132 SARATARVAALNVSRMQKLIATGAIARSQLDSARADWLVASARVKSSEAALRNARESLGW 191

Query: 158 TNITAPYDGIVTQRMVELGETVAPGTPL--LRGFSLDELRVETEIPQRYQPYVADVSQFT 215
           T +T+P +GI+T      G+ V  G  +  L      ++  +   P + +   A+  Q  
Sbjct: 192 TRLTSPGEGIITAVSASPGQVVNAGETVVTLAAGQARDVVFDIPDPAKVEAQRAEEFQVA 251

Query: 216 VRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFNYGQREVLVV 275
           + +  G     +   +   ADPQ+ T++ R  L +  AA+  G  V             V
Sbjct: 252 LLSDAGVNAFAILRDISPQADPQTRTWRVRATLKKPPAAMALGSSVTVRLPSSGSAGYAV 311

Query: 276 PSSAVLRRAELSAVYRVNNGQRA-LNPVRLGQVYGDYVEVLSGLELGDVVATQAVT 330
           P+SA+ R  E  AV+ +    +A L  V         V + SGL  GD V T  V+
Sbjct: 312 PASALSRCGEKPAVFVITPQMQAQLRVVVPASYTASSVIIASGLMPGDRVITAGVS 367