Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  101 bits (252), Expect = 3e-26
 Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 10/295 (3%)

Query: 42  GVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATA 101
           GVV    Q  L  +  G+++   VD    VK+ Q L+ +  V       A Q  + +A A
Sbjct: 54  GVVVARTQSDLGFRVQGKILERLVDTGQTVKQGQPLMRLDPVDLKLQAQAQQRAVDAAQA 113

Query: 102 QNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNIT 161
           + R+A +   RYR L   GA+S  + D  +A A SA A + +A+A    A+ + GY  + 
Sbjct: 114 RARKASSDEARYRGLVASGAVSASEYDQIKAAADSARAELSAARAQAGVAQNATGYAVLL 173

Query: 162 APYDGIVTQRMVELGETVAPGTPLLRGFSLDELRVETEIPQRYQPYVADVSQFTVRTAQG 221
           A  DG+V + + E G+ V+ G  ++R     +     ++P+  +P V   +   + T  G
Sbjct: 174 ADSDGVVMETLAEPGQVVSAGQAVIRLARAGQREALVQLPETLRPAVGSTA---LATLYG 230

Query: 222 EQLKPVEFS---LFSYADPQSHTFKTR--LELPQNSAALVPGMWVKTEFNYGQREVLVVP 276
            + +PV      L   AD  + TF+ R  L+    +A L   + +  E   G   V+ VP
Sbjct: 231 NEKQPVSAKLRLLSDSADATTRTFEARYVLDGALANAPLGATVTLSIEHGKGDSRVMQVP 290

Query: 277 SSAVLRRAELSAVYRVNNGQRAL--NPVRLGQVYGDYVEVLSGLELGDVVATQAV 329
            +++    +   V+R++     +   PVR+  V  D   V  G++ G+ +    V
Sbjct: 291 LASLYDAGKGPGVWRISAQPTKVVWQPVRVLSVGDDIARVTGGVQPGEKIVALGV 345