Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Multidrug resistance protein MdtA from Enterobacter sp. TBS_079

 Score =  107 bits (267), Expect = 4e-28
 Identities = 86/302 (28%), Positives = 140/302 (46%), Gaps = 22/302 (7%)

Query: 42  GVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSAALDAAQAQLASATA 101
           G ++ ++   + A+T G +  ++     +VKK  VL E+   +  AA+  AQA++ SA A
Sbjct: 41  GRIEAIHTVEIRARTEGVITQVHFRDGQYVKKGDVLFELDDAEPRAAVRLAQAEVKSAEA 100

Query: 102 QNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAAVEQAKESLGYTNIT 161
             R+AQ QL+R+  L    AIS+  +D+A  +   A AA++ A+A +E    +L YT IT
Sbjct: 101 TLRQAQQQLSRFESLGNSNAISRHDVDNARMQRDVASAALEQAKARLETRNVTLAYTRIT 160

Query: 162 APYDGIVTQRMVELGETVAPGT----------PLLRGFSLDELRVETEIPQRYQPYVADV 211
           +P DG V       G  V P +          P+   F+L+E    T+  Q      AD+
Sbjct: 161 SPIDGRVGHSQFHAGSLVNPSSGVLVDVVQLDPIRIAFALEEGAFATKAGQH-----ADI 215

Query: 212 SQFTVR-----TAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQNSAALVPGMWVKTEFN 266
           S           + G++L     S+ +  DP++ +   R E       L+PG  V     
Sbjct: 216 SALKRAWQARIDSNGQRLSGELTSVDNRIDPRTASVMLRAEFANPRHQLLPGGNVNVYLR 275

Query: 267 YGQRE-VLVVPSSAVLRRAELSAVYRVN-NGQRALNPVRLGQVYGDYVEVLSGLELGDVV 324
               + VL VP++AV +  E    + VN  G+    P+++    G   E+ SGL  G+  
Sbjct: 276 PASAQPVLTVPAAAVQQNGEGFFAWVVNAEGKAEKRPLKIAGQIGQQFEISSGLHPGERA 335

Query: 325 AT 326
            T
Sbjct: 336 IT 337