Pairwise Alignments

Query, 334 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Cupriavidus basilensis FW507-4G11

 Score =  109 bits (272), Expect = 1e-28
 Identities = 98/321 (30%), Positives = 146/321 (45%), Gaps = 20/321 (6%)

Query: 28  TVKTELISQIVELDGVVQPVNQGSLAAQTSGRVVGLYVDVNDFVKKDQVLLEISAVQQSA 87
           TV    +S I EL G ++ V    + A+ SG V+         VK  Q+L +I      A
Sbjct: 42  TVTPTTVSVINELPGRLEGVRTAEVRARVSGIVLSRNYTEGGEVKAGQLLFKIDPAPYQA 101

Query: 88  ALDAAQAQLASATAQNREAQAQLNRYRQLFPKGAISKDQMDSAEARARSADAAVKSAQAA 147
            L++A+A LA A A    A+ +  RY+ L    A+SK + D A A A  A A + SA+AA
Sbjct: 102 QLESAKASLARAEANAVAARQKAERYKPLVAVNAVSKQEYDEAVAAAGQATADIASAKAA 161

Query: 148 VEQAKESLGYTNITAPYDGIVTQRMVELGETVAPG--TPLLRGFSLDELRVETEIPQRYQ 205
           V  A+ +LGYT +TAP  G V + +V  G  V  G  T L     +D +RV    P    
Sbjct: 162 VSTAQINLGYTAVTAPISGRVGRALVTEGALVGSGEATKLTTVEQVDPIRVTFTQPASEV 221

Query: 206 PYV---------------ADVSQFTVRTAQGEQLKPVEFSLFSYADPQSHTFKTRLELPQ 250
             +               A V  F     + EQ   + FS  +  DP +     R + P 
Sbjct: 222 MKLRRAIESGKVKGVDGGARVHLFIEDGREYEQTGKLLFSDMT-VDPTTGAITLRAQFPN 280

Query: 251 NSAALVPGMWVKTEFNYGQRE-VLVVPSSAVLRRAELSAVYRV-NNGQRALNPVRLGQVY 308
               L+ G +V+ +   G  E  L VP  A++R A+ ++V  V ++G  A  PV+  Q  
Sbjct: 281 AKRELLSGTFVRVKIEQGVDENALTVPQRALIRNAQGASVMVVGSDGNVAAVPVKAPQAI 340

Query: 309 GDYVEVLSGLELGDVVATQAV 329
           G+   V  GL+ G+ V  + +
Sbjct: 341 GESWIVTEGLKGGEKVIVEGL 361