Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., Hydrophobe/amphiphile efflux-1 HAE1 from Pseudomonas syringae pv. syringae B728a

 Score =  269 bits (687), Expect = 9e-76
 Identities = 258/1065 (24%), Positives = 477/1065 (44%), Gaps = 95/1065 (8%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            ++ALV +L+G  ++   P  + P I      + + +PGAS + V+  V    EQ ++ I+
Sbjct: 14   VIALVIMLVGALSISSLPINQYPSIAPPAIGIQVTYPGASAQTVQDTVVQVIEQQLNGID 73

Query: 98   GIDKIYSFSQPDGAM-IVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPKG 156
             +  + S S  DG+M I A F  G   + A V++ NKL      +PQ V   + I   K 
Sbjct: 74   NLRYVSSESNSDGSMTITATFNQGTNPDTAQVQVQNKLNLATPLLPQEVQQ-QGIRVTKA 132

Query: 157  IEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIPGTRDIYTIGGQNTIVDVRLDPA 216
            +++  +V   +++      +     +   ++  + R  G  D    G Q  +  + LDPA
Sbjct: 133  VKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGSQYAM-RIWLDPA 191

Query: 217  KMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFL-------TRVEEVKQ-- 267
            K+N F +T   +  ++ A N      +L       P   GQ L       TR++  +Q  
Sbjct: 192  KLNNFQLTPVDVKDAITAQNVQVSSGQLGG----LPSISGQQLNATIIGKTRLQTAEQFG 247

Query: 268  ---LVVGLHNGTPVYLEDIATVSFGV-NTATQNVWTGDRDGIHPAVTIAVAKKGGENAVD 323
               L V   +G+ V L+D+ATV  G  N +T + + G      PA  +A+    G NA+D
Sbjct: 248  NIFLKVNT-DGSQVRLKDVATVGLGAENYSTDSQFDGK-----PASGLAIKLATGANALD 301

Query: 324  VAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAV-VILVLLTM 382
             AKA+ A + SLE    P G+ V    D     ++  N ++  L  A   V +++ L   
Sbjct: 302  TAKAIRATVSSLE-PFFPPGMKVVYPYDTTPVVSESINGVVHTLIEAIVLVFLVMYLFLQ 360

Query: 383  GWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHM 442
             +R +I+  M + V L+ T     A+GFT+N +++F ++ +IG+LVDDAIVVVEN+ R M
Sbjct: 361  NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVM 420

Query: 443  AMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLI 502
               K    +    ++ ++ G  +   L + A LLPMAF  G  G       I     M +
Sbjct: 421  EEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL 480

Query: 503  SLAVAFVLSPWLAGKFLKAGHHQEEGKAANGI---FHKIMSPFVTAPKQG-----RNRLF 554
            S+ VA + +P L    LK   H++ G+   G    F++     V + ++G     +++  
Sbjct: 481  SVVVALIFTPALCATMLKPIDHEKHGQPKRGFFGWFNRTFDRSVLSYERGVGNMLKHKWP 540

Query: 555  LLLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATL 614
              L  + + AG V +  F  +    LP +++      +  P GSS E+TQ V+ +M    
Sbjct: 541  AYLGYILICAGMVFM--FMRIPAAFLPEEDQGVIFAQIQTPAGSSTERTQEVIDQM---- 594

Query: 615  NDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAH-----QGDIQVNLLGRKERDRDSHT 669
                  R+Y +          +G V+  F  N  +     Q      ++ +   +RDS+ 
Sbjct: 595  ------REYLL-------TKESGAVKSVFSVNGFNFAGRGQSSAIAFVMLKPWEERDSNN 641

Query: 670  IASQLRPQLNEIAQRFGGKVKVVEVPP------GPPVWSPILAEVYGPTQEIRNEAARKV 723
               +L  +           +    VPP          +   L +  G   +   EA  + 
Sbjct: 642  SVFELAKRAQGYFFSLRDAMVFAVVPPSVLELGNATGFDVYLQDQGGVGHDKLMEARNQF 701

Query: 724  REIFRETKDIVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPIT-YL 782
              +  ++K +  V         ++Q++ID  +A+ L +  + I + L+ A+GG  +  ++
Sbjct: 702  LGMAAQSKILAGVRPNGLNDEPQYQLIIDDERASALGITLSDINNTLSIALGGSYVNDFI 761

Query: 783  HSEHSKYPIPIQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKN 842
                 K    + IQ    A++  E +    V +  G   P S     + +     +   N
Sbjct: 762  DRGRVK---KVYIQGDAGARMTPEDLKKWYVRNSAGEMVPFSAFASGKWSYGSPKLSRYN 818

Query: 843  LVPMVMVVGDMSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVT 902
             V    V+G       +P  G +  G A++E   LA+          G+ ++W G   ++
Sbjct: 819  GVAAEEVLG-------TPAPG-YSSGDAMNEVEALAKKL------PQGIGISWTG---LS 861

Query: 903  YE---TFRDMGIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQF 959
            YE   +       YA+ +++++L + A ++S+ +P+ ++  +PL +IG +   +L G   
Sbjct: 862  YEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVILVVPLGVIGALMATSLRGLSN 921

Query: 960  TATSMIGMIALAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMI 1019
                 +G++   G+  +N+IL+V+F  +  EQG +  +A I++  +R +PI++T++A ++
Sbjct: 922  DVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKSLVDAAIEACRMRLRPIIMTSMAFIL 981

Query: 1020 GAV-FILDDPIFNG----LAISLIFGIFVSTVLTLLVIPVLYYVV 1059
            G V   +     +G    +   +I G+  + +L +  +P+ +  V
Sbjct: 982  GVVPLAISSGAGSGSQHSIGTGVIGGMITAVILAIFWVPLFFVTV 1026



 Score = 43.5 bits (101), Expect = 8e-08
 Identities = 29/151 (19%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 917  MVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVR 976
            +VL++L++    +++   +I    +P+ ++G     A  G      +M GM+   G++V 
Sbjct: 348  IVLVFLVMYLFLQNFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMVLAIGLLVD 407

Query: 977  NSILLVDFINQQV-EQGMAFSEAVIQS-----AAVRAKPIMLTALAAMIGAVFILDDPIF 1030
            ++I++V+ + + + E+ ++  +A I+S      A+    ++L+A+   +         I+
Sbjct: 408  DAIVVVENVERVMEEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIY 467

Query: 1031 NGLAISLIFGIFVSTVLTLLVIPVLYYVVMR 1061
               +I+++  + +S V+ L+  P L   +++
Sbjct: 468  KQFSITIVSAMALSVVVALIFTPALCATMLK 498