Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1058 a.a., multidrug-efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  318 bits (816), Expect = 1e-90
 Identities = 283/1070 (26%), Positives = 500/1070 (46%), Gaps = 91/1070 (8%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            +L++V L++G  A    P  + P+I      V   +PGA    V + V TP EQ I+ +E
Sbjct: 16   VLSIVLLIVGSIAYFQLPVAQYPEIAPPTIVVRASYPGADAETVANTVATPLEQEINGVE 75

Query: 98   GIDKIYSFSQPDGAMIVAI-FKVGVPRNDAVVRIYNKLYSNKDWMPQGVG-VGEPIIKPK 155
             +  + S++  DG+M + I FK+G   + A V + N++   +  +P+ V  +G  +   K
Sbjct: 76   NMLYMSSYATADGSMALTITFKLGTDLDQAQVLVQNRVSIAEPRLPEEVRRIG--VTTTK 133

Query: 156  GIEDVPIVTITLADKSDRFDQQQLTQVAHG-LETELKRIPGTRDIYTIGGQNTIVDVRLD 214
               D+ +V + L   +DR+DQ  ++  A   +   L R+ G  D+   G +   + + LD
Sbjct: 134  SSPDLMMV-VHLLSPNDRYDQLYVSNYARTRIRDILVRLDGVGDVLLFGEREYALRIWLD 192

Query: 215  PAKMNGFGIT-------LDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQ 267
            P K++ +G+T       L + N  +   +   P +      Q      G+F    +    
Sbjct: 193  PQKLSAYGMTAGDVVSALREQNVQVSGGSIGGPPMSSDSAFQYTVTTDGRFSDARQFRYV 252

Query: 268  LVVGLHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKA 327
            +V     G  V L+D+A +  G      N +        PAV + +  + G NA+  A A
Sbjct: 253  IVKATEEGRLVQLQDVARIELGAREYVTNSYLNGS----PAVALGIFSRPGSNALAAADA 308

Query: 328  VEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTM-GWRE 386
            ++A +  L     P+G++  I  +  +  ++  + +   +A A   V ++V++ +  WR 
Sbjct: 309  IQATMTELSRDF-PEGLEYRIIYNPTEFISESIDEVYKTIAEAALLVALVVIVFLQSWRT 367

Query: 387  SIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGK 446
            +I+  +AI V+L+ T    +A+GF+LN ++LF L+ +IGI+VDDAIVVVEN+ R++A G 
Sbjct: 368  AIIPIVAIPVSLVGTFALLYAFGFSLNMLTLFGLVLAIGIVVDDAIVVVENVERNLARGM 427

Query: 447  RKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAV 506
                E     +DEVG   I  +L + A  +P AF+ G+ G +     +  ++  +IS   
Sbjct: 428  TP-REAAHVTMDEVGAAVIAISLVLTAVFVPTAFIPGIAGQFYLQFAVTIAVATVISAVN 486

Query: 507  AFVLSPWLAGKFLKAG-HHQEEGKA---------ANGI---FHKIMSPFV-TAPKQGRNR 552
            +  LSP LA   L+   +H  E +          ANG    F ++   +  T     R R
Sbjct: 487  SLTLSPALAAILLRPHENHDHESRNPLTRLGRGFANGFNRGFDRMADGYAWTVRHLVRTR 546

Query: 553  LFL---LLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFE 609
            + L   LL  +AL+  +  +   Q V    +P  ++    +V+ +P+G+SLE+T +V+  
Sbjct: 547  IALAGALLVFVALLGATWYMA--QVVPRGFIPTMDQGYAIVVIQLPDGASLERTDKVVRR 604

Query: 610  MGATLNDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQV---NLLGRKERDRD 666
                + +VP V+D   +AG      FNG        N ++ G I     +   R E+ + 
Sbjct: 605  ASEMIREVPGVKDAVAFAG------FNGAT----FTNASNSGVIFTPFDSFEERLEQKQS 654

Query: 667  SHTIASQLRPQLNEIAQRFGGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREI 726
            +  I  Q+   +  I + F     ++ VPP P V    +    G   +I +  +  +R  
Sbjct: 655  AEQIIGQIFGAMQGIQEAF-----IIAVPP-PSVRG--IGNSGGFKMQIMDRQSADMRRA 706

Query: 727  F----------RETKDIVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGG 776
                        +T+ +  V         ++ + IDR KA  L VP  +I + L+  +G 
Sbjct: 707  LGLAYQMMGAANQTEGLTGVFTTFTASSPQFFLAIDRDKARALNVPIPNIFETLSINLGT 766

Query: 777  KPITYLHSEHSKYPIPIQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDD 836
              +   ++    Y +  + QA +  ++  E +L +KV S +G   PL  LVE+R T    
Sbjct: 767  SYVNDFNAFGRVYQV--RAQADQQFRLEREDILALKVRSASGALVPLGTLVEIRDTSGPA 824

Query: 837  YIVHKNLVPMVMVVGDMSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWD 896
             +   N+   V V G+       P  G+   G ALD+   LA   + Q     G    W 
Sbjct: 825  LVQRYNMYVSVPVQGN-------PAPGV-STGSALDKMEALAGQILPQ-----GTTFEWT 871

Query: 897  GEWTVTYETFRDMGIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLG 956
                   +T       +A+ +V ++L + AQ++S+++PL I+  +PL ++  + G ++ G
Sbjct: 872  ELALQERQTGNTAVFIFALSVVFVFLALSAQYESWVLPLAIILIVPLAVLAALLGVSIRG 931

Query: 957  AQFTATSMIGMIALAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALA 1016
                  + IG+I L G+  +N+IL+V+F  Q  E+G    EA I ++ +R +PI++TA A
Sbjct: 932  FDNNVLTQIGLIVLIGLAAKNAILIVEFARQGEEEGKTPIEAAIDASRLRLRPILMTAFA 991

Query: 1017 AMIGAV--FILDDP---IFNGLAISLIFGIFVSTVLTLLVIPVLYYVVMR 1061
             ++G V   I   P   +   L  ++  G+   T L L + PV +YV +R
Sbjct: 992  FILGVVPLVIATGPGAEMRQSLGTAVFAGMLGVTFLGLFLTPV-FYVALR 1040