Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1073 a.a., AcrB/AcrD/AcrF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 1345 bits (3481), Expect = 0.0
 Identities = 691/1061 (65%), Positives = 847/1061 (79%), Gaps = 19/1061 (1%)

Query: 19   RLGISGRIAAAFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASP 78
            +LGISGRIA AFQ SA+TPLLAL+ LL+G+FAVMVTPKEEEPQIDVTFADV+IPFPGA+P
Sbjct: 8    QLGISGRIARAFQASAITPLLALLALLLGMFAVMVTPKEEEPQIDVTFADVFIPFPGATP 67

Query: 79   REVESLVTTPAEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNK 138
             EVE LVT PAEQVISEI+GID +YSFSQPDGA+I+AIF+VGV RNDA+V +YN++YSN 
Sbjct: 68   AEVEHLVTLPAEQVISEIKGIDTLYSFSQPDGALIIAIFEVGVKRNDAIVALYNQIYSNM 127

Query: 139  DWMPQGVGVGEPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIPGTRD 198
            D +P+G GVGEP+IKP+GI+DVPIV++TL  ++     +QLT VA GLETELKRIPGTR+
Sbjct: 128  DKLPRGAGVGEPLIKPRGIDDVPIVSLTLWSEAQDITPEQLTHVARGLETELKRIPGTRE 187

Query: 199  IYTIGGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQF 258
            IYT+G    +++VR+DPA ++ +G++   +N++L   NQ S  + L  DNQE  VQ GQF
Sbjct: 188  IYTLGQHELVLNVRIDPAALSAYGLSYSDINRALSGNNQISMPVPLIQDNQEIKVQTGQF 247

Query: 259  LTRVEEVKQLVVGLHNGT-----PVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAV 313
            L R+E+V++LVV +  G      PVYL D+A V+   +     V    +DG +PAVT+A+
Sbjct: 248  LRRLEDVQELVVAVRQGADGYSEPVYLADLAEVTLKSDLPRAQVQHVTKDGSYPAVTLAI 307

Query: 314  AKKGGENAVDVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTA 373
             K+ G NAVD+A AV  R+ +LEN L+P  +   ++R+YG TAADKSNTL+ KL FATTA
Sbjct: 308  GKQTGMNAVDIADAVIERMGALENTLLPANVHATVSRNYGDTAADKSNTLIFKLIFATTA 367

Query: 374  VVILVLLTMGWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIV 433
            VVILVL TMG RE++VVG+AII+TL +TLFASWAWGFTLNRVSLFALIFSIGILVDDAIV
Sbjct: 368  VVILVLFTMGMREALVVGIAIIITLALTLFASWAWGFTLNRVSLFALIFSIGILVDDAIV 427

Query: 434  VVENIHRHMAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIP 493
            VVENIHRHM+MGKR L ELIP AVDEVGGPTILAT TVIAALLPMAFVSGLMGPYMSPIP
Sbjct: 428  VVENIHRHMSMGKRSLRELIPVAVDEVGGPTILATFTVIAALLPMAFVSGLMGPYMSPIP 487

Query: 494  INASMGMLISLAVAFVLSPWLAGKFLKAGHHQ---EEGKAANG--------IFHKIMSPF 542
            INASMGMLISLAVAF+L+PWL+GK LKA  H+   +E ++ +G        IF +++ PF
Sbjct: 488  INASMGMLISLAVAFILTPWLSGKLLKAHPHEGTNQENESPHGGEDPRMVRIFTRLIGPF 547

Query: 543  VTAPKQGRNRLFLLLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEK 602
            +      + RL L L I+ LI  +V LPV QAVVLKMLPFDNKSEFQ+++DMPEG++ E+
Sbjct: 548  LNGKAGRKARLGLGLAIIGLIMVAVALPVMQAVVLKMLPFDNKSEFQVMVDMPEGTTFEE 607

Query: 603  TQRVLFEMGATLNDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKE 662
            T +VL  +   L  V EV+  Q+YAGTAAP+NFNGLVRHYF+R+    GDIQVNL  +K 
Sbjct: 608  THKVLQALADELATVEEVQHMQLYAGTAAPMNFNGLVRHYFLRSSPELGDIQVNLSDKKH 667

Query: 663  RDRDSHTIASQLRPQLNEIAQRFGGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARK 722
            R RDSH+IA  +R  L EI + FG  VKVVEVPPGPPVWSPI+AEVYGP + +R +AAR 
Sbjct: 668  RSRDSHSIALAVRGPLQEIGRHFGANVKVVEVPPGPPVWSPIVAEVYGPNEAMRQDAARN 727

Query: 723  VREIFRETKDIVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYL 782
            V  +F  T+D+VD+D++LP    KWQV+IDRSKAA L V YA IVD +AT+VGG+ ++ L
Sbjct: 728  VLGVFNTTQDVVDMDIFLPSGQHKWQVLIDRSKAALLGVSYAEIVDLVATSVGGRDVSVL 787

Query: 783  HSEHSKYPIPIQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKN 842
            H E+   P+PI++Q  E++K+ L+ ++ M +    G    +S+LV +R+  +D  I+HKN
Sbjct: 788  HLENQARPVPIRLQLEESSKLDLDAIMGMTLPGSRG-LVAISELVTIRKGVIDAPIIHKN 846

Query: 843  LVPMVMVVGDMSGELDSPLYGMFEIGFAL--DEQMGLAQYYIHQPDGLSGVAVAWDGEWT 900
            L+PMVMVV DM+G LDSPLYGMFE+   +   E+MG AQ+Y++QP GL+ VAV WDGEW 
Sbjct: 847  LIPMVMVVADMAGPLDSPLYGMFEMASTISDSEEMGYAQHYVNQPSGLTDVAVLWDGEWK 906

Query: 901  VTYETFRDMGIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFT 960
            +TYETFRDMGIAYAVGM+ IYLLVVAQF+SYLVPLIIMAPIPLT+IGVMPGHAL GAQFT
Sbjct: 907  ITYETFRDMGIAYAVGMIAIYLLVVAQFRSYLVPLIIMAPIPLTVIGVMPGHALFGAQFT 966

Query: 961  ATSMIGMIALAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIG 1020
            ATSMIGMIALAGIIVRNSILLVDFINQ+VE+G+ F++AVI S AVRAKPIMLTALAAMIG
Sbjct: 967  ATSMIGMIALAGIIVRNSILLVDFINQEVERGVPFAQAVIHSGAVRAKPIMLTALAAMIG 1026

Query: 1021 AVFILDDPIFNGLAISLIFGIFVSTVLTLLVIPVLYYVVMR 1061
            A+FILDDPIFNGLAISLIFGIF+ST+LTL+VIPVLYY  MR
Sbjct: 1027 ALFILDDPIFNGLAISLIFGIFISTLLTLVVIPVLYYSFMR 1067