Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  292 bits (747), Expect = 1e-82
 Identities = 259/1036 (25%), Positives = 476/1036 (45%), Gaps = 64/1036 (6%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            +L+L+ ++MG+ A+      E P ID     V  P+ GA+P  V++ +T   E  ++ + 
Sbjct: 16   VLSLLLVVMGIAAMTRLAVRELPDIDSAVVSVTTPYTGAAPEIVDTDITEVIENAVAGVS 75

Query: 98   GIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPKGI 157
            GI  I S S+      V  F+ GV  ++AV  + + +   +  +P  +   EP I     
Sbjct: 76   GIRTITSQSRRGQGRTVIEFESGVSMDEAVNDVRDAVAKVRGDLPDDIE--EPRIAKSDT 133

Query: 158  EDVPIVTITLADKSDRFDQQQLTQVAHG-LETELKRIPGTRDIYTIGGQNTIVDVRLDPA 216
            +  P++ ++L   S R    +LT  A   +   L  I G   +   G +   + + LD  
Sbjct: 134  DSDPVMRLSLT--SPRMTPIELTDFADRYIVDRLATIDGVAQVDLYGERRQAIRLWLDRR 191

Query: 217  KMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVGLHNGT 276
             M    +T+  +  +L  AN   P   +   ++   V+    LT  E     V+ + +G 
Sbjct: 192  AMAARQVTVQDVEAALRRANVELPAGEIESASRLLTVRAATLLTSPEAFGSTVIKVVDGY 251

Query: 277  PVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEARLVSLE 336
            P+ + D+A V  GV      V    RD    A+T+ V ++   N V ++  + A +  L 
Sbjct: 252  PLRVRDVARVELGVENDDTTVRVEGRD----ALTMGVLRQSQANTVAISNRIRAEIDRLR 307

Query: 337  NQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTMGW-RESIVVGMAII 395
              L P+G+ ++++ D         + ++  L  +   V+I+    +G  R ++V  + I 
Sbjct: 308  PSL-PEGMSLEVSSDDALFINRSIHEVILTLGLSGLIVIIVNFAFLGSIRATLVPTVTIP 366

Query: 396  VTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLSELIPP 455
            V ++ T       GF++N ++L ALI SIG++VDDAIVV+ENI R +  G+ KL      
Sbjct: 367  VAVIGTFIGILLLGFSINLLTLLALILSIGLVVDDAIVVLENIQRRIEAGEPKLVAAAR- 425

Query: 456  AVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVLSPWLA 515
               +V    +  +LT+IA  +P++F+ G +G   +      +  + IS+ VA  L P LA
Sbjct: 426  GTRQVTFAVVATSLTLIAVFVPISFMEGTVGRLFTEFGFVLACAVAISMLVALTLCPPLA 485

Query: 516  GKFLKAGHHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFLLLTI------LALIAGSVLL 569
               L       EGKA   + H +   F T  +  +  L  +L +      +AL+ G    
Sbjct: 486  AGVLA------EGKAEGRLAHALNYAFGTLSRGYQRALSAVLGLPMVVLTVALLCGGASF 539

Query: 570  PVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAGT 629
             ++Q +  +++P +++    + L+ P+G++   T   +  + A +  V +        G 
Sbjct: 540  WLYQGLPKELVPVEDRGVVVVSLNGPQGANTRYTDTQIRAVEAAVQPVLD-------RGE 592

Query: 630  AAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFGGKV 689
            A      G++      N+ H+G + + L   + R R +  +A  LR  L ++A    G  
Sbjct: 593  AV-----GVLAQVGQWNRPHRGYVVIRLDDWENRGRTASALAESLRKDLGKLA----GAT 643

Query: 690  KVVEVPPGPPVW---SPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERHEK 746
                VP G  +    +P+   + GP        A  + +   E   +++ ++   +   +
Sbjct: 644  ATPVVPAGLGLRGSRTPLQVVIGGPDYAEVEVWANALLKRAEELPGLINPELDFEQNQPQ 703

Query: 747  WQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATETAKVRLE 806
              V IDR +A  L V   +I   L T +  + +T       +Y + +Q +  +       
Sbjct: 704  LSVGIDRDRADDLGVGVEAIGQTLQTMLASREVTRFVDRGREYQVVVQARPEDRRTP--S 761

Query: 807  QVLNMKVGSPNGHAY-PLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMF 865
             + N  V +  G A  PL  LV +++T     +     +P +         L S L   +
Sbjct: 762  DLSNTFVRAEKGGALVPLDALVILKETAGAPDLNRYARLPSIT--------LQSALAPGY 813

Query: 866  EIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMVLIYLLVV 925
            ++G A+D+ M LA   +  P+    +A    G+     ET   +   + + +V++YL++ 
Sbjct: 814  DMGQAIDDVMALASQTV-PPEARLSLA----GQSKEFLETSGGVLFTFLMALVIVYLVLA 868

Query: 926  AQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDFI 985
            AQF+S+L PLIIM  +PL + G +      G      S IG++ L G+  +N IL+V+F 
Sbjct: 869  AQFESFLHPLIIMLSVPLAVSGALLSLWATGNSINVYSQIGIVLLIGLTAKNGILIVEFA 928

Query: 986  NQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFI-----LDDPIFNGLAISLIFG 1040
            NQ  ++G +  EA++++A++R +PI++T +  ++GAV +             + I +I G
Sbjct: 929  NQLRDEGRSVREAILEAASLRLRPILMTVICTILGAVPLAWSSGAGAESREAIGIVVIGG 988

Query: 1041 IFVSTVLTLLVIPVLY 1056
            + ++++LTL V PVLY
Sbjct: 989  LGLASLLTLFVTPVLY 1004