Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  277 bits (708), Expect = 3e-78
 Identities = 256/1041 (24%), Positives = 484/1041 (46%), Gaps = 61/1041 (5%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            +++++ +  GL +    P  E P ID     V   + GAS   VES +T   E  IS +E
Sbjct: 16   VISMLLIAFGLVSFDKLPLREYPNIDPPIVSVQTNYRGASAAVVESRITQLVEDRISGVE 75

Query: 98   GIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPKGI 157
            GI  I S S    + +   F VG     A   + +++    + +P+     E + K  G 
Sbjct: 76   GIRNINSSSSDGRSSVTLEFDVGRDIEAAANDVRDRISGLLNNLPEEADPPE-VQKANGG 134

Query: 158  EDVPIVTITLADKSDRFDQQQLTQVAHG-LETELKRIPGTRDIYTIGGQNTIVDVRLDPA 216
            ++V I+ + L   SD+ +  QLT  A   L      I G  +I   GG+   + V +D  
Sbjct: 135  DEV-IMWLNLV--SDQMNTLQLTDYARRYLVDRFSVIDGVANIRIGGGKVYAMRVWIDRQ 191

Query: 217  KMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVGL-HNG 275
             +    +T+  +   L + N   P   +   ++ F V++ +     E+   LV+    +G
Sbjct: 192  ALAARNLTVSDIESVLRSENVELPAGSVESQDRHFTVRLERTFKTAEDFNNLVLAEGEDG 251

Query: 276  TPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEARLVSL 335
              + L D+A V  G +   +  + G+R+ +   + + ++K+   N ++VA+A  A LV  
Sbjct: 252  YLIKLGDVARVEIG-SEEERITFRGNREAM---IGLGISKQSTSNTLEVARAANA-LVDK 306

Query: 336  ENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTMGW-RESIVVGMAI 394
             N  +P G+++  + D           +   L  A   V++++ L +G  R  ++  + +
Sbjct: 307  INPTLPAGMEIKRSYDSSVFIEASIKEVYQTLFIAMFLVIVVIYLFLGSVRAMLIPALTV 366

Query: 395  IVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLSELIP 454
             V+LM T    +A G+T+N ++L A+I +IG++VDDAIVV+ENIHR +  G   L     
Sbjct: 367  PVSLMATFIVLYALGYTINLLTLLAMILAIGMVVDDAIVVLENIHRRIEEGDSPLKAAYL 426

Query: 455  PAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVLSPWL 514
             +  EV    +  TL ++A  +P+ F+ G +G       +  S  ++ S  VA  LSP +
Sbjct: 427  GS-REVAFAVVATTLVLVAVFMPITFLEGDLGKLFKEFAVAMSAAVIFSSLVALTLSPMM 485

Query: 515  AGKFLK-AGHHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFLL--LTILAL-IAGSVLLP 570
              K LK AG      +  +   + + + +    K+     F++  L ++AL ++G ++  
Sbjct: 486  CSKLLKPAGQDPWLVRKIDAGMNWLSAGYRATLKRAMIHPFIVSSLVVIALGLSGYLMTK 545

Query: 571  VFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAGTA 630
            V Q    +  P +++    ++++ P+G+S E     + E+   L  + +  D +      
Sbjct: 546  VPQ----EFAPQEDRGSMFLIVNGPQGASFEYISPYMDEIENRLMPLVDSGDIKRLL-IR 600

Query: 631  APINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFGGKV- 689
            AP  F         R+      + + +L      R +  I   +R +L+++A   G +  
Sbjct: 601  APRGFG--------RSANFSNGMAIIVLEDWADRRSAFEIIGDIRARLSDLA---GVRAF 649

Query: 690  KVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERHEKWQV 749
             V+    G  V  P+   + GP+ E   +    + E  +E  ++V +D    E   + +V
Sbjct: 650  PVMRQAFGRGVGKPVQFVLGGPSYEELAKWRDILLEKAKENPNLVGLDHDYQETKPQLRV 709

Query: 750  VIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATETAKVRLEQVL 809
            VID+ +AA L V  + I   L + +G + +T    +  +Y + I+       +     + 
Sbjct: 710  VIDKDRAADLGVSISHIGRTLESMLGSRLVTTFMRDGEEYDVIIE--GNRDNQNTASDLS 767

Query: 810  NMKVGSPNGHAY-PLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMFEIG 868
            N+ V S       PL++LV V +      +   N +  + +  +++          + +G
Sbjct: 768  NIYVRSDRSRELIPLANLVSVEEFADASQLNRYNRMRAITIEANLADG--------YSLG 819

Query: 869  FALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMVLIYLLVVAQF 928
             ALD    LA  Y+      +   +++ G+     E+   M   + + + +++L++ AQF
Sbjct: 820  EALDYLNNLAYTYLP-----AEAVISYKGQSLDYQESGSSMYFVFLLALGIVFLVLAAQF 874

Query: 929  KSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQQ 988
            +SY+ P++IM  +PL  +G + G  + G      S IG+I L G+  +N IL+V+F NQ 
Sbjct: 875  ESYIHPMVIMLTVPLATLGALIGLWVTGQSLNIYSQIGIIMLVGLAAKNGILIVEFANQL 934

Query: 989  VEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNG--------LAISLIFG 1040
             ++G+ F  A+IQ+A+ R +PI++T +    GA+ ++   +  G        + + ++ G
Sbjct: 935  RDKGIEFDTAIIQAASQRLRPILMTGITTAAGAIPLV---LAQGAGAETRFVIGVVVLSG 991

Query: 1041 IFVSTVLTLLVIPVLYYVVMR 1061
            I ++T  TLLVIPV Y ++ R
Sbjct: 992  IILATFFTLLVIPVAYGLIAR 1012