Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1024 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

 Score =  282 bits (721), Expect = 1e-79
 Identities = 266/1043 (25%), Positives = 477/1043 (45%), Gaps = 64/1043 (6%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            + AL+ L+ G  + M   + E P+  +  A V   +PGASP +VE  VT P E  + +++
Sbjct: 16   MFALLLLIGGSLSFMSLGQLEFPEFTIKEALVVTAYPGASPEQVEEEVTLPLEDALQQLD 75

Query: 98   GIDKIYSFSQPDGAMIVAIFK-----VGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPII 152
            G+  I S +    + I    +       +P+   +VR   K+   +  +P G       +
Sbjct: 76   GVKHITSINSAGLSQIQIEMEDKYDAEKLPQIWDLVR--RKVSDTQGSLPSGA------M 127

Query: 153  KPKGIEDV-PIVTITLADKSDRFDQQQLTQVAHGLETELKRIPGTRDIYTIGGQNTIVDV 211
             P+ I+D   +  I L    D + +++L   A  L  EL  + G + +   G  +  V V
Sbjct: 128  TPQVIDDFGDVYGILLNLSGDGYSERELENYADFLRRELVLVDGIKRVNIAGIVDQQVVV 187

Query: 212  RLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVG 271
             +   K+N  G+  D +   + + N  S    +   +    +        VE + +LVV 
Sbjct: 188  EISTQKINALGLNQDYIYGLINSQNVVSNAGSIRVGDNRIRIHPTGEFDSVEALSRLVVS 247

Query: 272  LHNGTP-VYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEA 330
                   +YL DIA +   ++    N++    D    A+++ +A   G N V V +AV  
Sbjct: 248  APGSAKLIYLGDIANIYKAMDETPSNLYHSGGD---MALSVGIAFSSGVNVVKVGEAVNQ 304

Query: 331  RLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTMGWRESIVV 390
            ++++L ++L P G+ +    D  +      N  +  LA +   V+ ++L+ MG R  +++
Sbjct: 305  KMMALSDEL-PVGMMLTTVYDQSKMVDQTINGFLVNLAESIAIVIGVLLIFMGLRSGLLM 363

Query: 391  GMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLS 450
            G+ +++T++ T          L  +SL ALI ++G+LVD+AIVV E I   +  G+ +L 
Sbjct: 364  GLVLLLTILGTFIMMKVLNIELQIISLGALIIALGMLVDNAIVVTEGIIIGLKRGQSRL- 422

Query: 451  ELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVL 510
            E     + +   P + AT+  I A  P+       G +   + +   + + IS   A  L
Sbjct: 423  ETAKQVITQTQWPLLGATVIAIIAFAPIGLSDNATGEFCISLFLVLLISLFISWITAMTL 482

Query: 511  SPWLAGKFLKAGHHQEEGKAA--NGIFHKIMSPFVTAPKQGRNRLFLLLTILALIAGSVL 568
            +P+      K G   +E  +    G   ++    ++   + R  L LL+ +LAL+ GSV+
Sbjct: 483  TPFFCDLLFKDGEIPDEADSDPYKGWLFQLYRGSLSLAMRFRG-LTLLVVLLALV-GSVM 540

Query: 569  LPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAG 628
               F  V     P  N   F + + MPEGS ++ T+ +L  +   L    E +D  +   
Sbjct: 541  --GFGQVKNVFFPASNTPIFFVDVWMPEGSDIKATEALLGRIEQDLMAEQEKQDLGLVNI 598

Query: 629  TAAPINFNGLVRHYFM----RNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQR 684
            T+  +   G  R        +  A  G + + +   +  +     +   L     E   R
Sbjct: 599  TS--VVGQGAQRFVLPYVPEKGYAAYGQLLIEMSNLETLNAYMRRLEQDLVQHYPEAEYR 656

Query: 685  FGGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERH 744
            F    K +E  P P   + I A  YG   E+  + A++  EIF        V      RH
Sbjct: 657  F----KYMENGPSPA--AKIEARFYGEDPEVLRQLAQQASEIFLAEPSATSV------RH 704

Query: 745  EKW--QVVIDRSKAAHLQVPYASIV-----DALATAVGGKPITYLHSEHSKYPIPIQIQA 797
              W  QV + R + A  Q     I      +AL T   GK +  L+ E+S + +PI  +A
Sbjct: 705  N-WRNQVTLVRPQLALAQARETGISKQDLDNALLTNFSGKHVG-LYRENS-HLLPIIARA 761

Query: 798  TETAKVRLEQVLNMKVGSPNGHAY-PLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGE 856
                ++  + +  ++V S   + + P+S +V    T  +D ++ +     V+ V      
Sbjct: 762  PADERLNADSISALQVWSTENNVFVPISQVVSDFTTEWEDPLIMRRDRKRVISV------ 815

Query: 857  LDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVG 916
            L  PL G  E   ++  ++      I  P   +G  + W GE+  + E  + +  +  +G
Sbjct: 816  LADPLNGGNETADSVFRKLRPKVEAISLP---AGYELEWGGEYETSSEAQQSVFSSIPLG 872

Query: 917  MVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVR 976
             + ++L+ V  F S   PL+I   +PL +IGV+ G  L  A F+  +++G+++L G+I++
Sbjct: 873  YLAMFLITVLLFNSVRQPLVIWFTVPLALIGVVSGLLLFDAPFSFMALLGLLSLTGMIIK 932

Query: 977  NSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNGLAIS 1036
            N I+LVD IN ++ QG     AV  S+  R +P+++ A+  M+G + +L D  F  +AI+
Sbjct: 933  NGIVLVDQINLELSQGKDAYRAVFDSSVSRVRPVLMAAITTMLGMIPLLPDAFFGSMAIT 992

Query: 1037 LIFGIFVSTVLTLLVIPVLYYVV 1059
            +IFG+  ++VLTL+V+PV Y +V
Sbjct: 993  IIFGLGFASVLTLVVLPVAYTLV 1015