Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1023 a.a., cation/multidrug efflux pump from Dechlorosoma suillum PS

 Score =  326 bits (835), Expect = 6e-93
 Identities = 266/1046 (25%), Positives = 495/1046 (47%), Gaps = 74/1046 (7%)

Query: 38   LLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTPAEQVISEIE 97
            +L+L  +L+GL +       E P+ID     V   + GAS   VES ++ P E  ++ IE
Sbjct: 16   VLSLAVMLIGLVSYQRLSVREYPKIDEPVMTVTTTYRGASAEIVESQISKPLEDSLAGIE 75

Query: 98   GIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVGEPIIKPKGI 157
            G+D + S S+ + + I   F++    + A   + +++   ++ +P  +   EP+I     
Sbjct: 76   GVDVLTSISRQESSQISVRFRLERNPDSAASDVRDRVSRVRNRLPDDID--EPVIAKVEA 133

Query: 158  EDVPIVTITLADKSDRFDQQQLTQVAHGL-ETELKRIPGTRDIYTIGGQNTIVDVRLDPA 216
            +  P+  I LA  S++     +T +A+ + +  L+ +PG  D+   G +   + + LD  
Sbjct: 134  DASPV--IWLAFSSEKHSPLVVTDIANRVVKPRLQTLPGAADVRVFGERKFAMRIWLDKD 191

Query: 217  KMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEEVKQLVVGLHNGT 276
            ++    IT  ++  +L   N   P  R+    +EF V     L   E+   +VV   NG 
Sbjct: 192  RLAAHQITAQEVEDALRTQNVEVPAGRIESRQREFAVLAQTDLKEPEQFAAIVVKTVNGY 251

Query: 277  PVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDVAKAVEARLVSLE 336
            PV + D+  V  G      NV    R G  PAV++ + K+   N +D+++A+ A L  + 
Sbjct: 252  PVRIRDLGRVEIGAAAERTNV----RFGGKPAVSLGLIKQSTANPLDLSRALRAELPKIA 307

Query: 337  NQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTMGWRESIVVGMAIIV 396
             +L P G+ V+I  D      D+S  +    +    AV++++L+   +  ++   +  +V
Sbjct: 308  AEL-PDGLKVEIAYD-SSVFIDRS--IESVFSTIGEAVILVLLIIFFFLRNLRATLIPLV 363

Query: 397  TLMITLFASWAW----GFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMAMGKRKLSEL 452
            T+ ++L  ++A     GFT+N ++L AL+ +IG++VDDAIVV+ENI+RH+  G   +   
Sbjct: 364  TIPVSLIGAFALMFVLGFTINTLTLLALVLAIGLVVDDAIVVLENIYRHIEEGMPPIQAS 423

Query: 453  IPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLISLAVAFVLSP 512
            +  A  E+G   +  T+T+ A   P+AF++G +G       +  +  +L+S  VA  LSP
Sbjct: 424  LQGA-KEIGFAVVAMTITLAAVYAPVAFMTGRIGKLFIEFALTLAGAVLVSGFVALTLSP 482

Query: 513  WLAGKFLKAGHHQEEGKAANGI---FHKIMSPFVTAPKQGRNRLFLLLTILALIAGSVLL 569
             +    L+  H ++ GKA   I    + + + +        +R +++L   A +A    +
Sbjct: 483  MMCSVLLR--HEEKHGKAFVAIENFLNWLNAGYRRILGAALDRRWIVLVGFAAVA-LACV 539

Query: 570  PVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAGT 629
             + + +  ++ P +++     + + PEG++LE T +   ++      +P+  +Y + +G 
Sbjct: 540  GMLKLLKSELSPIEDRGVIFGIFNGPEGATLEYTDKYARQIEKIYAGIPDAANYFVVSGN 599

Query: 630  AAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFGGKV 689
              PI                QG   + L   KER   S  IA QL P+  +I        
Sbjct: 600  --PI--------------VSQGSAILRLKDWKERQHSSPEIAKQLLPRFRDIPG------ 637

Query: 690  KVVEVPPGPPVWSPILAE-------VYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPE 742
             V+  P  PP       E       V   + +       K      ++   ++VD  L  
Sbjct: 638  -VMAFPVTPPSLGQSARERPINFVIVSSASYQELQATTTKFLAAMAKSPLFLNVDTDLKL 696

Query: 743  RHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATETAK 802
               +  V ++R KAA L VP  ++   L T +GG+ +T    +  +Y + +Q+   + A 
Sbjct: 697  NLPQLSVAVNRDKAADLGVPVETVGRTLETMLGGRQVTRFKRDGEQYDVIVQVSDADRAN 756

Query: 803  VRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLY 862
             R   + ++ V   +G   PL++LV+V +T     + H      V +  +++        
Sbjct: 757  PR--DISDIYVRGKSGEMIPLANLVQVDETISPRELNHFGQRRAVTITANLAPGST---- 810

Query: 863  GMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMVLIYL 922
                +G  L    G+A     QP   +G AV ++G+      +   + + + + +  IYL
Sbjct: 811  ----LGEGLAAMEGIAGEV--QP---AGYAVDYNGQSREFKTSTASLALTFILALAFIYL 861

Query: 923  LVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNSILLV 982
            ++ AQF+S+  P IIM  +PL++ G +    L G      S IG++ L G+I ++ IL+V
Sbjct: 862  VLAAQFESFRDPFIIMLTVPLSMAGALLALLLSGGTLNVYSQIGLVTLVGLITKHGILIV 921

Query: 983  DFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFI-----LDDPIFNGLAISL 1037
            +F NQ  EQG    EAVI++A +R +PI++T  A ++GA+ +           + +   +
Sbjct: 922  EFANQLQEQGRNVREAVIEAAELRLRPILMTTGAMVLGAIPLALARGAGAESRSQIGWVI 981

Query: 1038 IFGIFVSTVLTLLVIPVLYYVVMRKR 1063
            + G+ + T  TL V+P +Y ++ R++
Sbjct: 982  VGGLLLGTFFTLFVVPTVYTLMARRK 1007