Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., AcrB/AcrD/AcrF family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  273 bits (698), Expect = 5e-77
 Identities = 251/1057 (23%), Positives = 467/1057 (44%), Gaps = 83/1057 (7%)

Query: 30   FQNSAMTPLLALVGLLM-GLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVTTP 88
            F    +T  L ++GLL  G+      P  + P +D     V    PGA P  + S V  P
Sbjct: 7    FIRRPVTTTLVMLGLLFFGVMGYRQLPVSDLPNVDFPTIQVRAQLPGADPETMASSVAAP 66

Query: 89   AEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKDWMPQGVGVG 148
             E+  + I GID + S +      I   F +    + A   +   + + +  +P  +   
Sbjct: 67   LERQFATIAGIDSMSSTNTQGNTRITIQFNLSRDIDAAAQDVQAAISTAQRKLPSDLTT- 125

Query: 149  EPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKR----IPGTRDIYTIGG 204
             P  +     D PI+ + L   +       L++V    ET + +    + G   +   G 
Sbjct: 126  PPSYQKVNPADQPILFLALTSPT-----LPLSKVNEYAETRIGQTISMVSGVAQVNVYGA 180

Query: 205  QNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRVEE 264
            +   V V++DP ++   G+ +D+++ ++  AN + P   L  ++    ++    L     
Sbjct: 181  KKYAVRVQVDPRRLKALGLGIDEVSAAVDKANSNLPTGTLQGEHTASIIKASGQLYDAAA 240

Query: 265  VKQLVVGLHNGTPVYLEDIATVSFGVNTATQNVWTGDRDGIHPAVTIAVAKKGGENAVDV 324
             + +VV   NG PV LE++  V   V       W  D  GI     +AV ++ G N V+V
Sbjct: 241  YRPVVVAYRNGAPVRLEELGRVVDSVEQDRILNWFNDERGI----VLAVQRQPGTNTVEV 296

Query: 325  AKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLTM-G 383
             ++++  L   E QL P  + ++I  D  ++       +   L      VV+++ L +  
Sbjct: 297  VESIKRLLPEFERQL-PAAVKLNILFDRSESIKASVAEVKFTLVLTVCLVVLVIFLFLRS 355

Query: 384  WRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHMA 443
               +++  +A+ +++++T  A    GF+L+ +SL AL  ++G +VDDAIV++ENI RHM 
Sbjct: 356  LSATVIPSLALPMSVVVTFAAMHMMGFSLDNLSLMALTLAVGFVVDDAIVMLENIVRHME 415

Query: 444  MGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGMLIS 503
            MGK  L   +  A  E+G   I  T+++ A  +P+ F+ G++G       +  ++ +L+S
Sbjct: 416  MGKTPLRAALDGA-REIGFTIISMTVSLAAVFIPVLFMGGIVGRLFHEFAVVITVAILLS 474

Query: 504  LAVAFVLSPWLAGKFLKAGHHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFLLLTI---- 559
              V+  L+P L   FLK       G+  +G  +  +  F     +G  R  L  T+    
Sbjct: 475  GFVSLSLTPMLCALFLK----PHVGQRRHGRVYNALETFFETLHRGYER-SLRFTMRHHR 529

Query: 560  ----LALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLN 615
                L+++   V + +F A+    LP ++  +     +  +  S  +  ++   +   + 
Sbjct: 530  MTFGLSMVVLGVTVWLFAAMPKGFLPSEDTGQISGFTEADQSVSFGQMVKLQKTLHPIIA 589

Query: 616  DVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLR 675
              P V  +    G   P N  G    +F+R           L    ERD    TI ++LR
Sbjct: 590  ADPGVDSFSSTVGAGGP-NVGGNSGRFFIR-----------LKDFDERDEHVDTIINRLR 637

Query: 676  PQLNEIAQRFGGKVKVVEVPPGPPVWSPILAEVY-----GPTQEIRNEAARKVREIFRET 730
             +L+     F G    +  PP   V       +Y     GP      +A  ++    RE 
Sbjct: 638  AKLS----GFPGINVFLVNPPSINVGGRASKSLYQYTLQGPDTAELYKAGTELEAALREL 693

Query: 731  KDIVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYP 790
              + DV   L  R+ + +V IDR KAA L +    + DAL +A G + ++ + +  + Y 
Sbjct: 694  PQLRDVTSDLQIRNPEVRVDIDRDKAAALGLSVHQVEDALQSAYGTRQVSTILAPDNDYQ 753

Query: 791  IPIQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVV 850
            + +++            +LN++  S +G   PL  +  +R +     + H    P V   
Sbjct: 754  VILELLPEYQRDASSMSLLNVR--SASGRLVPLDTIATLRPSVGPLAVNHSGQFPSV--- 808

Query: 851  GDMSGELDSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMG 910
                  L   L     +  A+    G+A  Y+  P   +G    + G       + + M 
Sbjct: 809  -----TLSFNLRPGVSLSEAVQAVEGIAGQYL--PPTATG---TFQGTAQAFQSSMQGMA 858

Query: 911  IAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIAL 970
            +   + +V+IY+++   ++S++ PL I++ +P   +G +    + G      + +G+I L
Sbjct: 859  MLLFMAVVVIYIVLGVLYESFIHPLTILSGLPSAGLGALVTLFIFGIDLNLYAFVGIIML 918

Query: 971  AGIIVRNSILLVDF-INQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPI 1029
             GI+ +N+I+++DF +  + + G +  EA++Q   +R +PIM+T +AA++G +     PI
Sbjct: 919  IGIVKKNAIMMIDFAVEAERKNGASPYEAILQGCLIRFRPIMMTTMAALMGTL-----PI 973

Query: 1030 FNG----------LAISLIFGIFVSTVLTLLVIPVLY 1056
              G          L ++++ G+ VS +LTL + PV Y
Sbjct: 974  AVGWGPGAEARQPLGLAVVGGLLVSQLLTLYITPVYY 1010