Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score =  278 bits (711), Expect = 1e-78
 Identities = 246/1044 (23%), Positives = 474/1044 (45%), Gaps = 52/1044 (4%)

Query: 27   AAAFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGASPREVESLVT 86
            + A  N  +T +L +V L+ GL+      + E+P+  +  A +  P+ GAS  EVE  VT
Sbjct: 5    SVAINNRVVTLVLTVVMLIAGLYIFNGMSRLEDPEFTIKDALIITPYNGASALEVEQEVT 64

Query: 87   TPAEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYSNKD----WMP 142
               E+ + ++  +DK+ S S+   + I    K    + + + +++NKL    D    ++P
Sbjct: 65   ELLEKTVQQLGELDKVTSKSERGLSTITVTIKEQYNK-ETLPQVWNKLRQKIDDVKYYLP 123

Query: 143  QGVGVGEPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIPGTRDIYTI 202
             G G   P +      DV   +I +    D +  ++L    + L+ +L  + G   I T 
Sbjct: 124  PGAG---PSLVIDDYGDV--YSIFMVVSGDGYSFKELKTYVNDLQQQLLLVNGVGKITTF 178

Query: 203  GGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVGQFLTRV 262
            G ++  + +  + ++M   GI+ + +   L          R    +    V      T+V
Sbjct: 179  GEKSEAIYIEFNRSRMAQLGISPEIVAAQLNGKGLVVDAGRAHVGSSSIAVSTTGGFTKV 238

Query: 263  EEVKQLVVGLHNGTPVYLEDIATVSFG-VNTATQNVWTGDRDGIHPAVTIAVAKKGGENA 321
             + ++L++  H+    YL DIA VS G V+ +TQ +    + GI     + ++   G N 
Sbjct: 239  SDFEKLLI-THDTKQFYLSDIAKVSRGYVSPSTQLINFDGKAGIG----LGISTVSGGNT 293

Query: 322  VDVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAFATTAVVILVLLT 381
            VD+ +AV A+L  LE+Q  P GI+        +   +  +     LA A   V++++L  
Sbjct: 294  VDMGEAVLAKLSELESQR-PAGIEFGYVSLQSEGVKEAISGFTSSLAEAVIIVIVVLLFF 352

Query: 382  MGWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRH 441
            MG R  +++G  +I+T+  +       G  L R+SL ALI ++G+LVD+AIVVV+ I   
Sbjct: 353  MGLRSGLLIGFVLILTIAGSFIFLAPMGVALERISLGALIIALGMLVDNAIVVVDGILIR 412

Query: 442  MAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYMSPIPINASMGML 501
            M  G+   S   P  V++   P + ATL  I A   +   +   G Y   +     + +L
Sbjct: 413  MQKGESAESAA-PRVVNQSAWPLLGATLIAILAFAAIGTSNDATGEYCRSLFQVVMVSLL 471

Query: 502  ISLAVAFVLSPWLAGKFLKAGHHQEEGKAANGIFHKIMSPFVTAPKQGRNRLFLLLTILA 561
            +S   A  ++P L   +LKA    ++     G F+      + +    R+R     +I+ 
Sbjct: 472  LSWVTAVTITPLLCVMYLKAPKSTDKTSPYQGTFYTKYRGLLASSI--RHRYLSSASIIG 529

Query: 562  LIAGSVLLPVFQAVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVR 621
            + A S  L  F  V     P   +++F +   +P+G+ +E+TQ+    +   L ++  V 
Sbjct: 530  IFALS--LWGFSFVQQNFFPSSTRAQFMVDFWLPQGTHIEETQKHAESVENYLGNLANVE 587

Query: 622  DYQIYAGTAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLN-E 680
                  G  A      L+ +   ++ +      V        D D +T+   L P++  E
Sbjct: 588  HVTTTIGEGA---LRFLLTYQPQQSNSSYAQFLV--------DVDDYTVIKTLIPKIEVE 636

Query: 681  IAQRF-GGKVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMY 739
            + Q++    V       G      I A + GP  ++  E + KV E+F +  +   V   
Sbjct: 637  LLQKYPDALVYASPFELGTGTAGKIQARISGPDTDVLRETSDKVLEVFSKESNTKGVRTD 696

Query: 740  LPERHEKWQVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATE 799
               +    + V+   +A    +    + +A+  +  G   T ++ E+    +PI I+A E
Sbjct: 697  WRNKQLYIEAVLAEEQANINGINRGMVAEAIKESFEGVT-TGVYRENDLL-LPIIIRANE 754

Query: 800  TAKVRLEQVLNMKVGSPNGHAY-PLSDLVEVRQTRMDD-YIVHKNLVPMVMVVGDMSGEL 857
              +  +  + N+++ SPN     PL  +V+  +T+ +D  I+ +N    + +  D     
Sbjct: 755  NERSDITNIENVQIWSPNAQKMIPLRQVVQSFETKFEDGLILRRNRERTITIFAD----- 809

Query: 858  DSPLYGMFEIGFALDEQMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGM 917
              P+ G         E +   +  +       G  + W GE+  + +  + +  +  + +
Sbjct: 810  --PVTG------TASELLATLKPQVEAIKIPPGYTLEWGGEYEDSSKAEKGLASSIPIFI 861

Query: 918  VLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRN 977
            + + L+ +  F S    L+I   +PL +IGV  G       F   +++G ++L G++++N
Sbjct: 862  LSMILITIVIFNSLKQTLVIWLCVPLALIGVTAGMLATNQPFGFMALLGFLSLIGMLIKN 921

Query: 978  SILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNGLAISL 1037
            +I+LVD IN +  QG +   +++ S   R +P+ + AL   +G + ++ D  F  +A+++
Sbjct: 922  AIVLVDEINLEQSQGKSLINSILDSGVSRLRPVAMAALTTALGMIPLIFDAFFVSMAVTI 981

Query: 1038 IFGIFVSTVLTLLVIPVLYYVVMR 1061
            I G+  +T LT++V+P++Y ++ +
Sbjct: 982  ISGLMFATALTMIVLPIVYALIFK 1005