Pairwise Alignments

Query, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1076 a.a., acriflavin resistance protein (RefSeq) from Shewanella sp. ANA-3

 Score = 1375 bits (3558), Expect = 0.0
 Identities = 700/1073 (65%), Positives = 851/1073 (79%), Gaps = 28/1073 (2%)

Query: 15   DMESRLGISGRIAAAFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFP 74
            +  + LGISGRIAAAFQNSA+TPLLAL+GLL+GLFA++VTPKEEEPQIDVTFADV+IPFP
Sbjct: 6    ESSTSLGISGRIAAAFQNSAITPLLALLGLLLGLFAILVTPKEEEPQIDVTFADVFIPFP 65

Query: 75   GASPREVESLVTTPAEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKL 134
            GA+P EVE+LVT PAEQVISE++GID +YSFSQPDGAMI+ IFKVGV RNDA+V +YN++
Sbjct: 66   GATPTEVENLVTLPAEQVISELKGIDTLYSFSQPDGAMIIVIFKVGVTRNDAIVSLYNQI 125

Query: 135  YSNKDWMPQGVGVGEPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIP 194
            YSN D +PQG GVGEP+IKP+GI+DVPIV++TL  K  +   +QLT +A GLETE+KRIP
Sbjct: 126  YSNMDKLPQGAGVGEPLIKPRGIDDVPIVSLTLWSKDKQVSAEQLTHLALGLETEIKRIP 185

Query: 195  GTRDIYTIGGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQ 254
            GTR+IYT+G    + +VR+DPAKMN F +T D+L QSL   N  S    L   NQE  VQ
Sbjct: 186  GTREIYTVGQHEMVANVRIDPAKMNSFNLTYDKLRQSLNDNNHISMPASLVQGNQEIKVQ 245

Query: 255  VGQFLTRVEEVKQLVVGLHNGT-----PVYLEDIATVSFGVNTATQNVWTGDRDGIHPAV 309
             GQFL  +++VKQLVV +         PVYL D A +S   +  TQ+VW  D+  I+PAV
Sbjct: 246  AGQFLQSIDDVKQLVVSISQDKQGKPIPVYLADTADISLKSDIPTQSVWHSDKTDIYPAV 305

Query: 310  TIAVAKKGGENAVDVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLMGKLAF 369
            TIA+ K+ G+NAVD+A A  AR+  ++N LIP  ++V ++R+YG+TAADKSNTL+ KL F
Sbjct: 306  TIAIGKQPGQNAVDIADATLARIAKVKNVLIPSNVEVTVSRNYGETAADKSNTLILKLIF 365

Query: 370  ATTAVVILVLLTMGWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSIGILVD 429
            AT+AVV+LV LTMG RES+VVG+AII+TL ITLFASWAWGFTLNRVSLFALIFSIGILVD
Sbjct: 366  ATSAVVVLVFLTMGARESLVVGVAIIITLAITLFASWAWGFTLNRVSLFALIFSIGILVD 425

Query: 430  DAIVVVENIHRHMAMGKRKLSELIPPAVDEVGGPTILATLTVIAALLPMAFVSGLMGPYM 489
            DAIVVVENIHRHMA+GK+  SELIP AVDEVGGPTILAT TVIAALLPMAFVSGLMGPYM
Sbjct: 426  DAIVVVENIHRHMALGKKSFSELIPVAVDEVGGPTILATFTVIAALLPMAFVSGLMGPYM 485

Query: 490  SPIPINASMGMLISLAVAFVLSPWLAGKFLKAGHHQEEGKAANG---------------- 533
            SPIPINASMGMLISL VAF+++PWL+ K LK  HH   G A N                 
Sbjct: 486  SPIPINASMGMLISLVVAFMVTPWLSRKLLK--HHS--GSATNTAHSSDADAQMNESKMV 541

Query: 534  -IFHKIMSPFVTAPKQGRNRLFLLLTILALIAGSVLLPVFQAVVLKMLPFDNKSEFQIVL 592
             +F +++ PF+      + R+ L   +  LI  +V LPV Q VVLKMLPFDNKSEFQ+++
Sbjct: 542  RLFTRLIGPFLLGKGARKARIGLAAGVFVLIGIAVALPVGQLVVLKMLPFDNKSEFQVMV 601

Query: 593  DMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAGTAAPINFNGLVRHYFMRNQAHQGD 652
            DMPEG+ +E+TQRVL ++   L  VPEV   Q+YAGT AP+NFNGLVRHYF+R+    GD
Sbjct: 602  DMPEGTPVEQTQRVLQDLSRYLATVPEVEHLQLYAGTNAPMNFNGLVRHYFLRHSQELGD 661

Query: 653  IQVNLLGRKERDRDSHTIASQLRPQLNEIAQRFGGKVKVVEVPPGPPVWSPILAEVYGPT 712
            IQVNL+ +K R RDSH+IA  +R +L  I  ++   VKVVEVPPGPPVWSPI+AEVYGP+
Sbjct: 662  IQVNLVDKKHRKRDSHSIALSVREELQHIGAKYQANVKVVEVPPGPPVWSPIVAEVYGPS 721

Query: 713  QEIRNEAARKVREIFRETKDIVDVDMYLPERHEKWQVVIDRSKAAHLQVPYASIVDALAT 772
              IR +AA +++ +FRETKD+VD+D++LP   +KWQV+IDRSKA+ + VPY++IVD +AT
Sbjct: 722  PAIREQAAYELQSLFRETKDVVDIDIFLPAAQQKWQVMIDRSKASLMAVPYSNIVDLIAT 781

Query: 773  AVGGKPITYLHSEHSKYPIPIQIQATETAKVRLEQVLNMKVGSPNGHAYPLSDLVEVRQT 832
            +VGGK ++YLH    K P+PI++Q  E AK+ LEQVLNMK+ S  G + P+S+LV +++ 
Sbjct: 782  SVGGKDVSYLHIAQQKQPVPIRLQLQEGAKIDLEQVLNMKLQSQTGQSVPVSELVTIKRG 841

Query: 833  RMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMFEIGFALDEQMGLA--QYYIHQPDGLSG 890
            ++D  I+HKN++PMVMVV DM+G LDSPLYGMF++   +D + GL   Q+YIHQP GL  
Sbjct: 842  KIDAPIIHKNMIPMVMVVADMAGPLDSPLYGMFDMAGKIDGEGGLGFDQHYIHQPTGLDS 901

Query: 891  VAVAWDGEWTVTYETFRDMGIAYAVGMVLIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMP 950
            VAV WDGEW +TYETFRDMGIAYAVGM+ IYLLVVAQF+SYLVPLIIMAPIPLT+IGVMP
Sbjct: 902  VAVLWDGEWKITYETFRDMGIAYAVGMIAIYLLVVAQFRSYLVPLIIMAPIPLTVIGVMP 961

Query: 951  GHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQQVEQGMAFSEAVIQSAAVRAKPI 1010
            GHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQ+   G+ F  AVI S AVRAKPI
Sbjct: 962  GHALLGAQFTATSMIGMIALAGIIVRNSILLVDFINQETASGVPFERAVIHSGAVRAKPI 1021

Query: 1011 MLTALAAMIGAVFILDDPIFNGLAISLIFGIFVSTVLTLLVIPVLYYVVMRKR 1063
            MLTALAAMIGA+FILDDPIFNGLAISLIFGIF+ST+LTL+VIPVLYY  M+ R
Sbjct: 1022 MLTALAAMIGALFILDDPIFNGLAISLIFGIFISTLLTLIVIPVLYYAAMKNR 1074