Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (610), Expect = 6e-68
 Identities = 126/293 (43%), Positives = 178/293 (60%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M   +DL LFV  A  GS S AA  + L+ A  SAA++R+E+ +   L  RSTR +RLT 
Sbjct: 1   MLRFDDLQLFVRAADLGSLSAAARVMDLSAAVASAALKRIEQHLGARLLARSTRSLRLTA 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
           EGE FL   + AL++L EG   +   + Q++G L +SAPSDLGRNLLL W+D F   HP 
Sbjct: 61  EGEGFLEYARAALSSLDEGRRLLTSGQDQVSGVLQLSAPSDLGRNLLLPWLDAFQREHPG 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           +TV+L L DR+ D++  PVDIA+RYG P DS+LVA+ +   N RVLCASP+YL  H    
Sbjct: 121 LTVRLLLGDRIADLFKQPVDIALRYGDPEDSSLVALPIAADNRRVLCASPDYLDRHGAPH 180

Query: 181 HPDDLQHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIAN 240
             + L  HNCL +ML   +H++W         S+ V G+   +D +VV R AV G GIA 
Sbjct: 181 QLEQLAQHNCLLYMLGSRVHDRWGFHDGKREVSLTVSGDRFSDDADVVRRWAVAGAGIAY 240

Query: 241 KSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIREK 293
           KS +D+S D+  GRL  +LP  +    P+ ++CA R  ++  I   ++ ++ +
Sbjct: 241 KSWLDVSTDVQAGRLKILLPHLQCERAPLNLLCAHRAQLSKPINLLRDMLQAR 293