Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (410), Expect = 9e-45
 Identities = 100/288 (34%), Positives = 153/288 (53%), Gaps = 4/288 (1%)

Query: 6   DLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGEIF 65
           ++++F   A++GS S AA +L LT +AVS  I R E+++   L +R+TR I  T EGE F
Sbjct: 9   EMSVFATVAQEGSLSAAARALGLTPSAVSRIIARTEQRLGTRLLLRTTRAITFTAEGEAF 68

Query: 66  LAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTVKL 125
           L   +  LA + E +++    +G   G+L +SA    GR  ++  +  F A +PN+ V L
Sbjct: 69  LRGARRILADMDE-VEEAIADQGVPRGRLLVSAALGHGRQAIVPLVAAFSARYPNIVVDL 127

Query: 126 DLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPDDL 185
            L D + D+     D+A+R+G   DS L A  + D+ + V+ ASP+YL  H   + P+DL
Sbjct: 128 TLGDEVVDILGGQADVAVRFGHLPDSPLTARRIGDTGQ-VVVASPDYLQRHGTPVEPEDL 186

Query: 186 QHHNCLCFMLADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSLMD 245
             HNCL F       N W   R+G   S+ V GN  C+ GE + + A  G GIA      
Sbjct: 187 LRHNCLRFNFRRAEPN-WPFIRDGREFSLKVSGNIECSSGEALAQFARVGAGIARIGEFT 245

Query: 246 ISQDIIDGRLVRILPEWESGP-VPIYMVCADRRLITPTIRAFQEFIRE 292
           +S+D+  G L+ +L  W  G   PI+ V      +   +R F +F+ E
Sbjct: 246 VSEDLQRGDLIPLLEAWNPGDREPIHAVFVGGSAMPARVRLFVDFLLE 293