Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (376), Expect = 8e-41
 Identities = 96/280 (34%), Positives = 145/280 (51%), Gaps = 5/280 (1%)

Query: 16  QGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTHEGEIFLAKTQTALAT 75
           QGSF  AA  L      +S  +  LE ++   L  RSTRHIRLT  G + + + + A   
Sbjct: 21  QGSFVAAARLLQRHPTIISKRLAALEARLGVRLLERSTRHIRLTEAGTLLVKRLRLATEL 80

Query: 76  LQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPNVTVKLDLSDRLTDMY 135
           + E   + A    ++ G L ++ P+ LGR  L   + EF+A HP++T+ ++ S+RL D+ 
Sbjct: 81  MAEAEQEAASGAAEVRGNLRLAVPAALGRLWLAPILPEFLAAHPHLTLTVNYSERLVDVI 140

Query: 136 ANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPILHPDDLQHHNCLCFM- 194
           A   D+AIR G+  DS L+A  L D + R+LCASP Y+  +     P +L  HNCL F  
Sbjct: 141 AEGFDVAIRLGELNDSRLIAKRLGD-HRRILCASPGYIERYGWPASPTELTQHNCLGFTG 199

Query: 195 LADTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGIANKSLMDISQDIIDGR 254
           LA   + +W L    E  +V  QG+   ND E +   A+ G GI        S+ +    
Sbjct: 200 LAS--YPEWKLISASEQVTVRPQGSLVSNDSEALLSAAIAGTGILGAGEWLFSRALAYKE 257

Query: 255 LVRILPEWESGPV-PIYMVCADRRLITPTIRAFQEFIREK 293
           LVR+LP+WE G    IY++    +  +    A +E++  K
Sbjct: 258 LVRVLPDWELGAKGGIYLIRPSAKFASSATLALKEWLEAK 297