Pairwise Alignments

Query, 313 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (398), Expect = 2e-43
 Identities = 102/293 (34%), Positives = 147/293 (50%), Gaps = 4/293 (1%)

Query: 1   MKALNDLNLFVETARQGSFSKAANSLSLTTAAVSAAIRRLEEQVQFPLFVRSTRHIRLTH 60
           M  L  +  F + A  GSFS+AA  L L+ + VS  +  LE+++   L  R+TR + LT 
Sbjct: 1   MDRLTLMETFTKVAELGSFSRAAERLGLSRSVVSKYVSALEDRLGARLVNRTTRRLSLTE 60

Query: 61  EGEIFLAKTQTALATLQEGLDQIACARGQLAGQLHISAPSDLGRNLLLDWIDEFIALHPN 120
            GE++L + Q  LA L+E         G   G L I+AP   G   L   I  F+A HP 
Sbjct: 61  VGEVYLLRCQAILADLEEAEQAAGALHGAARGTLRINAPMSFGFRHLAAAIPPFLAHHPG 120

Query: 121 VTVKLDLSDRLTDMYANPVDIAIRYGQPADSNLVAMLLCDSNERVLCASPEYLAAHPPIL 180
           + V + L DR  D+     D+A+R G   DS+L+A+ L   +  V+CASPEY+ A     
Sbjct: 121 LGVDMTLDDRFVDLLDAGFDVAVRIGSLPDSSLIAVRLAPLH-IVVCASPEYIKAQGAPE 179

Query: 181 HPDDLQHHNCLCFMLA--DTLHNKWILSRNGETHSVVVQGNPACNDGEVVHRLAVKGKGI 238
            P+DL  HNCL + L     L+   + +  GE  SV V G    N+G+ +   AV G G+
Sbjct: 180 RPEDLTGHNCLIYSLQRFGDLY-PLVHAGGGEQVSVPVHGRFRANNGDALRAAAVAGGGV 238

Query: 239 ANKSLMDISQDIIDGRLVRILPEWESGPVPIYMVCADRRLITPTIRAFQEFIR 291
                     D+  GRLVR+LPEW      I  V    R ++  +RAF + ++
Sbjct: 239 MISPTFLCGDDLRAGRLVRLLPEWTGPEQGINAVYPHNRHVSAKVRAFVDHLK 291